Pairwise Alignments

Query, 422 a.a., DNA polymerase V subunit UmuC (NCBI) from Escherichia coli BW25113

Subject, 424 a.a., Error-prone, lesion bypass DNA polymerase V (UmuC) from Pseudomonas sp. S08-1

 Score =  367 bits (941), Expect = e-106
 Identities = 203/422 (48%), Positives = 271/422 (64%), Gaps = 4/422 (0%)

Query: 1   MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60
           ++AL D N+FYASCE VFRPDL   P+VVLSNNDGCVIAR+A+AK   VKMG  + + + 
Sbjct: 5   VYALIDCNSFYASCERVFRPDLQRTPIVVLSNNDGCVIARSADAKPF-VKMGALFHEIRG 63

Query: 61  LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120
             +R G+V FSSNY LY DMS RVM+ LE   P VE+YSI+EAF D+TG+     L   G
Sbjct: 64  DLKRHGIVAFSSNYALYGDMSERVMTILEASFPSVEVYSIEEAFADMTGLPE--PLGSIG 121

Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180
           R+++A V Q+T + VGVGIA TKTLAKLAN AAK+W + TGGVVD+ +  R+ KL+ A+P
Sbjct: 122 RQVQAEVKQKTRIPVGVGIATTKTLAKLANAAAKRWLKHTGGVVDIRDSVRRDKLLKAIP 181

Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240
           V++VWGIG R+   L+ M IK   +LA  D   +RK FN+V+E+TVRELRG  CL++E  
Sbjct: 182 VEEVWGIGPRLRAHLEGMQIKAAWELAQMDAWTLRKRFNLVVEKTVRELRGIACLEIESE 241

Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300
              KQEI  SRSFG+R+ +   +++A+ +YA RAAEKLR +   CR +   ++T  F   
Sbjct: 242 IEPKQEICSSRSFGKRLRELAPIQEAVAAYAIRAAEKLRKQESLCRQVRVSLRTGMFNPA 301

Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360
           E  Y N    +L  PT DSR II A    L  +++ G  Y KA V+L D   +     +L
Sbjct: 302 EVKYANGILCQLPYPTDDSRLIIQAVQTGLKQVYRDGFSYAKAQVLLLDLCRKNEYTPDL 361

Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420
           F    P   +E+LM+ +D +N++ GR TL         +W M+R  LSP YT R +DLL 
Sbjct: 362 FAPEQP-IRTERLMSTLDEINSRWGRSTLQPGRTAKPAEWPMRREFLSPAYTIRWTDLLV 420

Query: 421 VK 422
            K
Sbjct: 421 AK 422