Pairwise Alignments

Query, 319 a.a., 23S rRNA pseudouridylate synthase (NCBI) from Escherichia coli BW25113

Subject, 318 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Pectobacterium carotovorum WPP14

 Score =  514 bits (1323), Expect = e-150
 Identities = 258/319 (80%), Positives = 283/319 (88%), Gaps = 2/319 (0%)

Query: 1   MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKL 60
           MKT+ PSV+ V I+ADEAGQR+DNFL T LKGVPKSM+YRILRKGEVR+NKKR+KPEYKL
Sbjct: 1   MKTDNPSVQFVTISADEAGQRVDNFLHTHLKGVPKSMVYRILRKGEVRINKKRVKPEYKL 60

Query: 61  EAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHILVLNKPSGTAVHGGSGLS 120
             GD +RIPPVR AER+E  VS  L KVAALA+ I+YEDD++LVLNKPSGTAVHGGSGLS
Sbjct: 61  LDGDVIRIPPVRQAERDETPVSASLGKVAALAECIIYEDDYLLVLNKPSGTAVHGGSGLS 120

Query: 121 FGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALV 180
           FGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLR KGMQKDYLALV
Sbjct: 121 FGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLRLKGMQKDYLALV 180

Query: 181 RGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGR 240
           RGQWQSH K VQAPLLKNILQSGERIVRV+ +GK SETRFK+EER+  ATLVR SPVTGR
Sbjct: 181 RGQWQSHCKVVQAPLLKNILQSGERIVRVNSDGKQSETRFKIEERFEHATLVRASPVTGR 240

Query: 241 THQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRI 300
           THQIRVH Q+AGHPIAFDDRYGDREFD+QL  A TGL RLFLHA AL+F HP TGE +R+
Sbjct: 241 THQIRVHAQHAGHPIAFDDRYGDREFDQQL--ADTGLKRLFLHAQALRFEHPNTGETLRV 298

Query: 301 EAPMDEGLKRCLQKLRNAR 319
           EAP+D GL+RCLQ LR  +
Sbjct: 299 EAPLDSGLRRCLQVLRKTK 317