Pairwise Alignments

Query, 1061 a.a., fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) from Escherichia coli BW25113

Subject, 498 a.a., ribonuclease, Rne/Rng family from Kangiella aquimarina DSM 16071

 Score =  303 bits (777), Expect = 2e-86
 Identities = 180/476 (37%), Positives = 268/476 (56%), Gaps = 15/476 (3%)

Query: 4   MLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAE 63
           +LIN T QE  RVALV+   L ++ +E   +     NIYKG + R+ P ++AAFVD G +
Sbjct: 5   ILINVTPQET-RVALVENGVLQEVHLERTSNRGIVGNIYKGIVRRVMPGMQAAFVDIGHD 63

Query: 64  RHGFLPLKEIAREYFPANYSA-----------HGRPNIKDVLREGQEVIVQIDKEERGNK 112
           R  FL + +I       N  A               +I  +L EGQ++IVQ+ K+  G+K
Sbjct: 64  RAAFLHVADIVAIKSDENKQAVEGSELLDKQESHEADITTLLHEGQKIIVQVIKDPIGSK 123

Query: 113 GAALTTFISLAGSYLVLMPNNPRAGGISRRIEG-DDRTELKEALASLELPEGMGLIVRTA 171
           GA LTT I++   +LVLMP+NP  G +S+RIE  D+RT LK+ LA  +     G I+RTA
Sbjct: 124 GARLTTHITIPSRFLVLMPDNPHVG-VSQRIEDLDERTRLKDLLADTDFGSDTGYIIRTA 182

Query: 172 GVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILI 231
             G S   L  D+ F  K W  I +  ++  AP LIH++  + +R  RD +  DI  + +
Sbjct: 183 AEGASDIELDRDVKFLSKLWSGISEKGKTAKAPQLIHEDLALELRIMRDIIEDDIERVRV 242

Query: 232 DNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSI 291
           DN K  +     +     P+  ++I+LY GE P+F  Y IE +I+ A +R+V L SGG +
Sbjct: 243 DNQKSFKRILNFVMEF-MPEIKNRIELYEGERPIFDLYNIEEEIKRALERKVPLKSGGYL 301

Query: 292 VIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMT 351
           +ID TEA+T +D+N+       ++EET F TNLEAA  +ARQLRLR+LGG+I++DFIDM 
Sbjct: 302 IIDQTEAMTTVDVNTGAFIGHKNLEETIFRTNLEAATALARQLRLRNLGGIIIVDFIDMQ 361

Query: 352 PVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTG 411
              H+R V   L +AV +D  +  IS +S  GL+EM+R+R   SL       C +C+G G
Sbjct: 362 DEEHKRQVLRTLEKAVERDHVKTSISEVSTLGLVEMTRKRSRESLERLMCEPCQQCNGRG 421

Query: 412 TVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQD 467
            V+   ++   I R I   +   + Q+   +    +   LL+E+ S++  +E   D
Sbjct: 422 FVKTPVTICYEIFREISRASRAYDVQKFLVLANQEVIDCLLDEEASSLAELEVDID 477