Pairwise Alignments

Query, 163 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 165 a.a., putative inner membrane protein from Escherichia coli BL21

 Score = 57.8 bits (138), Expect = 9e-14
 Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 12/162 (7%)

Query: 1   MNILLSIAITTGILSGIWGWVAVSLGL------LSWAGFLGCTAYFACPQGGLKGLAISA 54
           MN L +  +T GI +G+W  V+  +GL      L   GF+   +++A   GG  G   S 
Sbjct: 1   MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCSFYAAG-GGKSGFIRSL 59

Query: 55  ATLLSGVVWAMVIIYGSALAPHLEILGYVITGIV-----AFLMCIQAKQLLLSFVPGTFI 109
           A   SG+VWA      +     +  L      ++     + ++  Q +  LLSF+PG F+
Sbjct: 60  AVNYSGMVWAFFAALAAGWLASVSGLSAFWASVITTVPFSAVVVWQGRFWLLSFIPGGFL 119

Query: 110 GACATFAGQGDWKLVLPSLALGLIFGYAMKNSGLWLAARSAK 151
           G    FA   +W + L     G   G   +  G  L+  + K
Sbjct: 120 GMTLFFASGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATTK 161