Pairwise Alignments

Query, 586 a.a., predicted peptidase (NCBI) from Escherichia coli BW25113

Subject, 798 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

 Score = 55.5 bits (132), Expect = 8e-12
 Identities = 69/272 (25%), Positives = 112/272 (41%), Gaps = 44/272 (16%)

Query: 272 IREAARYTGEQETLPLSPQWILRQCKEVASLCDGDT-----FSGEQLNLMLQQREWREGF 326
           IR+  RY   +  +    + I + C++V     G        + EQL  +L  R++R G 
Sbjct: 524 IRDIIRYYTREAGVRGLERQIAKVCRKVVKEHTGQKQVKVKVASEQLEHLLGVRKFRYG- 582

Query: 327 LAERMQDEILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTD 386
           LAE+                ++IGQ+  L+  +  G      E   I  VV  G G+   
Sbjct: 583 LAEQQ---------------DQIGQVTGLAWTQVGG------ELLTIEAVVIPGKGQLI- 620

Query: 387 IERKAELGGNIHAKGMMIMQAFLMSE-----LQLEQQIPFSASLTFEQSYSEVDGDSASM 441
              K    G++  + +   Q  + S      +  +        +   +  +  DG SA +
Sbjct: 621 ---KTGSLGDVMVESITAAQTVVRSRARSLGIAADFHEKHDVHIHMPEGATPKDGPSAGI 677

Query: 442 AELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNEKIEGFFAICQQRELTGKQGVI 501
               AL+SAL  +PV   +A+TG +   G+   +GGL EK+     +   R   G + VI
Sbjct: 678 GMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGGLKEKL-----LAAHR--GGIKTVI 730

Query: 502 IPTANVRHLSLHSELVKAVEEGKFTIWAVDDV 533
           IP  NVR L    E +K   + K   W +D+V
Sbjct: 731 IPEENVRDLKEIPENIKQDLQIKPVKW-IDEV 761