Pairwise Alignments

Query, 179 a.a., putative fimbrial-like protein (VIMSS) from Escherichia coli BW25113

Subject, 174 a.a., type 1 fimbrial protein from Serratia liquefaciens MT49

 Score = 60.8 bits (146), Expect = 1e-14
 Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 14/178 (7%)

Query: 5   VLTAFITVVCATSSVMAADDNAITDGSVTFNGKVIAPACTLVAATKDSVVTLPDVSATKL 64
           ++ A +  +   S   AA+  +   G+VTF G +I   C++   + D  V L D+++ +L
Sbjct: 6   IMLAAVMTLGTISMANAANQGS---GTVTFKGSIIDAPCSIEPGSLDQTVKLGDIASVQL 62

Query: 65  QTNGQVSGVQIDVPIELKDCDTTVTKNATFTFNGTADTTQITAFANQASSDAATNVALQM 124
           +  G+      D+ I+L  CD    K+ T TF+GT         A + S+  A+     +
Sbjct: 63  KNGGK--STPQDILIKLVGCDVETAKDVTTTFSGTESEAVPGLLAMKGSARGAS-----I 115

Query: 125 YMNDGTTAITPDTETGNI-LLQDGDQTLTFKVDYIATGKA---TSGNVNAVTNFHINY 178
            +ND    + P T       ++DG  TL F       G +   T G  N+V +F + Y
Sbjct: 116 AINDIDGKLLPLTTASKAQKIEDGQATLRFSAHLQGDGASAAITPGEFNSVADFTLAY 173