Pairwise Alignments

Query, 179 a.a., putative fimbrial-like protein (VIMSS) from Escherichia coli BW25113

Subject, 182 a.a., major type 1 subunit fimbrin (pilin) from Escherichia coli BL21

 Score = 85.1 bits (209), Expect = 6e-22
 Identities = 59/180 (32%), Positives = 85/180 (47%), Gaps = 6/180 (3%)

Query: 3   KSVLTAFITVVCATSSVMAADDNAITDGSVTFNGKVIAPACTLVAATKDSVVTLPDVSAT 62
           K++    ++ +  +S+   A    +  G+V F G+V+  AC + A + D  V L  V   
Sbjct: 4   KTLAIVVLSALSLSSTAALAAATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTA 63

Query: 63  KLQTNGQVSGVQIDVPIELKDCDTTVTKNATFTFNGTA-DTTQITAFANQAS-SDAATNV 120
            L   G  S   +   I+L DCDT V   A   F GTA D       A Q+S + +ATNV
Sbjct: 64  SLAQEGATSSA-VGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVLALQSSAAGSATNV 122

Query: 121 ALQMYMNDGTTAITPD--TETGNILLQDGDQTLTFKVDYIATGKATSGNVNAVTNFHINY 178
            +Q+    G  A+T D  T +    L +G  T+ F+  Y ATG AT G  NA   F + Y
Sbjct: 123 GVQILDRTG-AALTLDGATFSSETTLNNGTNTIPFQARYFATGAATPGAANADATFKVQY 181