Pairwise Alignments

Query, 615 a.a., predicted carboxypeptidase (NCBI) from Escherichia coli BW25113

Subject, 562 a.a., L,D-transpeptidase from Dickeya dianthicola 67-19

 Score =  613 bits (1581), Expect = e-180
 Identities = 305/547 (55%), Positives = 384/547 (70%), Gaps = 30/547 (5%)

Query: 70  AAEKARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQLAEVAIAGFQ 129
           AA K+   + + LPAG  P YL++L  LYA + MQPMW +   VKAFQQQLAEVA++G Q
Sbjct: 45  AASKSHASVSAGLPAGVSPHYLSELTALYARQHMQPMWSDSHVVKAFQQQLAEVALSGIQ 104

Query: 130 PQFNKWVELLTDPGVNGMARDVVLSDAMMGYLHFIANIPVKGTRWLYSSKPYALATPPLS 189
           PQF  WV  LTDP +NG ARDVVLSDAM+GY+ F+A +   G  WLYSS PY LA P   
Sbjct: 105 PQFTTWVTWLTDPKLNGFARDVVLSDAMLGYMQFVAGVEKNGNSWLYSSVPYKLAAPSAE 164

Query: 190 VINQWQLALDKGQLPTFVAGLAPQHPQYAAMHESLLALLCDTKPWPQLTGKATLRPGQWS 249
           ++ QWQ A+  G  P F+A LAP+H QYA MH++L  +L D +PWP+L    +LRPG  S
Sbjct: 165 MMEQWQRAVASGNGPAFIASLAPRHSQYAKMHDALKNMLTDNRPWPKLILADSLRPGDES 224

Query: 250 NDVPALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKP 309
           N +P L+EIL RTGML+              D    P      +    PM          
Sbjct: 225 NALPVLKEILLRTGMLN-------------QDGGAMPLFNEASSGNASPM---------- 261

Query: 310 APAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLL 369
                  Y+ ++VEAVKRFQ  QGL  DG IG  TRDWLNV+   RA +LALNIQRLRL+
Sbjct: 262 ------RYEGDVVEAVKRFQHSQGLQDDGVIGKRTRDWLNVSSQIRATLLALNIQRLRLV 315

Query: 370 PTELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPP 429
           P ++S+GI+VNIP YSL YYQNG ++L S+VIVG+P RKTP+M+S+L+NVV+NPPWNVP 
Sbjct: 316 PDKVSSGIVVNIPNYSLSYYQNGAEILSSKVIVGQPKRKTPLMNSSLSNVVMNPPWNVPT 375

Query: 430 TLARKDILPKVRNDPGYLESHGYTVMRGWN-SREAIDPWQVDWSTITASNLPFRFQQAPG 488
           TL R+DI+PKV  DPGYL+ HGYTV+  W  S + IDP  +DW  ++ASN P+R +QAPG
Sbjct: 376 TLTRQDIIPKVIQDPGYLQRHGYTVLSDWTESAQPIDPSMIDWPMVSASNFPYRLRQAPG 435

Query: 489 PRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAGWN 548
            RNSLGRYKFN+P+++AIYLHDTPNHNLF++D RALSSGCVRVNKAS+LA +LLQDAGWN
Sbjct: 436 DRNSLGRYKFNIPNTDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASELAGLLLQDAGWN 495

Query: 549 DKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPARSSSQIVS 608
           + RIS  L+QG+T YV +RQ +PVN YYLTA+V  DG+ Q+RTDIYNYD   +  +  +S
Sbjct: 496 NARISSTLEQGNTTYVAVRQRVPVNFYYLTAWVSDDGKPQFRTDIYNYDDTVKIGALALS 555

Query: 609 KAEQLIR 615
           K   L++
Sbjct: 556 KVGLLLQ 562