Pairwise Alignments

Query, 615 a.a., predicted carboxypeptidase (NCBI) from Escherichia coli BW25113

Subject, 520 a.a., L,D-transpeptidase family protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  177 bits (448), Expect = 1e-48
 Identities = 152/521 (29%), Positives = 220/521 (42%), Gaps = 102/521 (19%)

Query: 94  LQLLYAARDMQPMWENRDAVKAFQQQLAEVAIAGFQ-PQFNKWVELLTDPGVNGMARDVV 152
           ++  Y     +P+W N D V+A     A     G     +  +V L  DP     + D+ 
Sbjct: 56  VRAFYEMNGWRPVW-NADRVRALNTVAAGANRHGLAGSDYFDFVGLAADPA----SADLR 110

Query: 153 LSDAMMGYLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVA---- 208
            + A + Y   +A   V+                P +V + W++  ++  LP  ++    
Sbjct: 111 TTAAALAYARVLAEGKVR----------------PETVEDLWEMQKNRVDLPRGLSDALT 154

Query: 209 ---------GLAPQHPQYAAMHESLLAL--LCDTKPWPQLTGKATLRPGQWSNDVPALRE 257
                    GLAP    Y  +    +    L     WP+ T  AT+ PG     +PAL +
Sbjct: 155 RNVLGQWYDGLAPTDIGYQNLSAGYVRYRRLAAQGGWPRFTQGATIEPGNSDRRIPALID 214

Query: 258 ILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAY 317
                       ++T  GD +  D     S   V                         Y
Sbjct: 215 ------------RLTAEGDLSAADGARLKSQGLV-------------------------Y 237

Query: 318 DNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELSTG- 376
           + EL  AV+ FQ   GLGADG IG  T+  L  +   RA  +ALN++R R L  E++   
Sbjct: 238 NAELQRAVQSFQNRHGLGADGRIGAGTQRSLGASAEDRARQIALNLERRRWLKREVAPER 297

Query: 377 IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDI 436
           I VN  A  +VY+++G  V  +RV+VG  + +TP +     +VV NPPW VP  +AR++I
Sbjct: 298 IEVNTAAAIMVYWKDGKPVHSNRVVVGSAENQTPSLEKPFASVVANPPWYVPAGIARREI 357

Query: 437 LPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRY 496
           LPK    PGYL ++              D +  D + I          Q  GPR++LG  
Sbjct: 358 LPK---GPGYLAAN--------------DMYVKDGTVI----------QRAGPRSALGYV 390

Query: 497 KFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAGWNDKRISDAL 556
           KF +  S AI+LHDTP+   F   TR  S GCVRV  A + A +LL        +   A 
Sbjct: 391 KFELRDSYAIFLHDTPSKAAFNLSTRQRSHGCVRVQNAVEFARLLLSPDPAKLAQFDTAQ 450

Query: 557 KQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597
              +T  V   + I V L Y TAFV   GR  +R D+Y  D
Sbjct: 451 DTRETTRVTTGREISVRLLYWTAFVDGQGRVAFREDVYGRD 491