Pairwise Alignments

Query, 573 a.a., fused cysteine transporter subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) from Escherichia coli BW25113

Subject, 582 a.a., lipid A ABC transporter ATP-binding protein/permease MsbA from Serratia liquefaciens MT49

 Score =  204 bits (519), Expect = 8e-57
 Identities = 145/494 (29%), Positives = 250/494 (50%), Gaps = 31/494 (6%)

Query: 91  VLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMV 150
           V+ H+R   F  ++ +  +   +   G LL+R+  D +       +V S    A V   V
Sbjct: 96  VVMHMRRRLFGHMMRMPVSFFDQQSTGTLLSRITYDSE-------QVASSSSSALVT--V 146

Query: 151 VTIGLSFLD-FTLAFTLGGIMLLTLFLMPPLFYRA-------GKSTGQNLTHLRGQYRQQ 202
           V  G S +  FT+ F     + + L ++ P+   A        ++  +N+ +  GQ    
Sbjct: 147 VREGASIIALFTMMFYYSWQLSVILIVLAPIVSIAIRIVSKRFRNISKNMQNTMGQVTTS 206

Query: 203 LTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILM 262
               L+G  E+ IFG       +  +   +  +   +    +++S  I+ LI +LA+  +
Sbjct: 207 AEQMLKGHKEVLIFGGQQVETDRFNSVSNRMRQQGMKLVSASSISDPIIQLIASLALAFV 266

Query: 263 LWMAS-GGVGGNAQPGALIALF--VFCALAAFEALAPVTGAFQHLGQVIASAVRISDLTD 319
           L+ AS   V      G +  +F  +   +   ++L  V   FQ       +   I D+  
Sbjct: 267 LYAASFPSVMETLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFSILDMEQ 326

Query: 320 QKPEVTFPDTQTRVADRVS--LTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGC 377
           +K      DT TR   R    +  R+V F YP +   AL+ I+L ++ G+ +A++GR+G 
Sbjct: 327 EK------DTGTREVTRAKGDIEFRNVTFYYPGKETPALRDINLSISEGKTVALVGRSGS 380

Query: 378 GKSTLLQQLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLA 437
           GKST+   LTR +D Q+GEIL++   +     A+LR  +++V Q VHLF+ T+ +N+  A
Sbjct: 381 GKSTIANLLTRFYDVQEGEILMDGHDLREYTLASLRDQVALVSQNVHLFNDTIANNIAYA 440

Query: 438 SPGS-SDEALSEILRRVGLEKLLE--DAGLNSWLGEGGRQLSGGELRRLAIARALLHDAP 494
                + E + +  R       +E  + GL++ +GE G  LSGG+ +R+AIARALL D P
Sbjct: 441 REERYTREEIEKAARMAYAMDFIEKMENGLDTVIGENGVMLSGGQRQRIAIARALLRDCP 500

Query: 495 LVLLDEPTEGLDATTESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQG 554
           +++LDE T  LD  +E  I   L E+ + +T L++ HRL  + +  +I+V+++G+I+E+G
Sbjct: 501 ILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGRIVERG 560

Query: 555 THAELLARQGRYYQ 568
            HA L+ +QG Y Q
Sbjct: 561 EHAVLIEKQGAYAQ 574