Pairwise Alignments

Query, 276 a.a., predicted amidase and lipoprotein (NCBI) from Escherichia coli BW25113

Subject, 190 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Pectobacterium carotovorum WPP14

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 46/117 (39%), Positives = 63/117 (53%), Gaps = 16/117 (13%)

Query: 67  QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQ 126
           +V++H L+     R +G+  I Q VP  + AWHAG+S + G  R ND SIGIELE     
Sbjct: 71  RVAAHCLI-----RRDGQ--ITQYVPFDQRAWHAGVSVFEGRERCNDFSIGIELEGTDT- 122

Query: 127 KSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPW 183
                    PF   Q  +L+ + + ++  Y I P  +  H+DIAP RK DPGP F W
Sbjct: 123 --------LPFTAQQYHSLVAITRLLMRAYPITPSRITGHSDIAPGRKTDPGPAFDW 171