Pairwise Alignments

Query, 276 a.a., predicted amidase and lipoprotein (NCBI) from Escherichia coli BW25113

Subject, 290 a.a., N-acetylmuramoyl-L-alanine amidase from Dickeya dadantii 3937

 Score =  318 bits (816), Expect = 6e-92
 Identities = 157/277 (56%), Positives = 200/277 (72%), Gaps = 4/277 (1%)

Query: 2   RRFFWLVAAAL---LLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDS 58
           RR  W   A +   LLAGC   +  V++  Y LD    A +   R++ LV HYTA++   
Sbjct: 3   RRLVWRSVALMALTLLAGCQNRERYVDEGDYLLDQSSPAVSRGERVRFLVFHYTAENLGD 62

Query: 59  SLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGI 118
           SL TLT ++VS+HYLVPA P + NGKP  W+LVPE + AWHAG S WRG ++LN TSIGI
Sbjct: 63  SLETLTTERVSAHYLVPAYPLQVNGKPVAWKLVPESQTAWHAGTSYWRGYSQLNATSIGI 122

Query: 119 ELENRGWQKSA-GVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDP 177
           E  N GW+++A G +++ P+ P QI  +  LA+DIIARYHI P++VV H+DIAPQRK DP
Sbjct: 123 EQVNPGWRQTASGTRWWQPYTPQQITLVTHLARDIIARYHIAPQDVVGHSDIAPQRKVDP 182

Query: 178 GPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPRE 237
           GPLFPW QLA  GIGAWP+ QRV+FYL GR  + PV+   LL+ LARYGY+V P+MT  +
Sbjct: 183 GPLFPWHQLAMAGIGAWPEPQRVHFYLKGRQEYAPVERNVLLDKLARYGYEVSPEMTASQ 242

Query: 238 QRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYG 274
           Q++V+ AFQMHFR   Y+GEADAET+AIA+ALLEKYG
Sbjct: 243 QQQVVAAFQMHFRQQRYDGEADAETEAIADALLEKYG 279