Pairwise Alignments

Query, 306 a.a., predicted peptide transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 313 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  278 bits (712), Expect = 9e-80
 Identities = 144/312 (46%), Positives = 209/312 (66%), Gaps = 8/312 (2%)

Query: 1   MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEADAQVIELVRQQLGLDQP 60
           ML  + KRLL  +PTL +VS++VF    +LPGDP   +AG E D  VI  +R +L LD P
Sbjct: 1   MLELICKRLLLAVPTLLLVSMMVFGLQKLLPGDPLIAMAGEERDPAVIAQLRAELNLDAP 60

Query: 61  LYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLTITSMVWAVIFGMAAGIIA 120
           +  Q++H+++ A+QGD G+S+ +  PV   IAS+   TL L++ +M+ A++FG++ GI+A
Sbjct: 61  IPVQYFHWLTRALQGDLGVSLRTHEPVTQLIASKLPVTLELSLLAMIIALVFGISMGILA 120

Query: 121 AVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELGWLPTVG--------ADSWQH 172
           AV +N W D  +  +A+SGIS P F LG+LLI VFSV L WLP  G          + + 
Sbjct: 121 AVNKNSWVDHGANFVAISGISIPHFWLGILLILVFSVNLQWLPASGYVPFSEDPIQNLRT 180

Query: 173 YILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVV 232
            +LP+  LG  +AA + R TRAS + VL  DY+RTARAKG+    V+LKH  RNA++PV+
Sbjct: 181 LLLPASVLGTGLAATLMRHTRASMIAVLKADYIRTARAKGLLPKAVILKHAFRNALVPVI 240

Query: 233 TMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLFSLEFILINLVV 292
           T+  L FG LLGG+++ E+VF  PG G+++VDSV  RDY V+Q  +L+ ++ F+++NL+ 
Sbjct: 241 TLTTLLFGELLGGAVLTEQVFTIPGFGKMIVDSVFNRDYAVVQGVVLIVAIGFLMLNLLA 300

Query: 293 DVLYAAINPAIR 304
           DVLY  INP +R
Sbjct: 301 DVLYVLINPKMR 312