Pairwise Alignments

Query, 372 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

Subject, 590 a.a., transporter from Agrobacterium fabrum C58

 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 5/132 (3%)

Query: 17  LLILVGIGLSFFVPFAPKSWPAAIDWHTIITLSGLMLLTKGVELSGYFDVLGRKMVRRFA 76
           LL+ V +G+   VPF  K++    D   +I +   ++++  V  SG  D+  +K      
Sbjct: 34  LLVAVALGV---VPFN-KAFSGFSD-DIVIIVGSALIVSSAVARSGIVDMTIKKYFPEMR 88

Query: 77  TERRLAMFMVLAAALLSTFLTNDVALFIVVPLTITLKRLCEIPVNRLIIFEALAVNAGSL 136
           ++     F+++  A++S F+ N  AL I++P+     R    PV+  ++  A A   G L
Sbjct: 89  SKSLQLAFLMIMVAVMSAFIKNIGALAIMMPVAFQFARKSGSPVSYYLMPMAFAALLGGL 148

Query: 137 LTPIGNPQNILI 148
           +T IG   NI++
Sbjct: 149 MTQIGTSPNIVV 160



 Score = 36.2 bits (82), Expect = 2e-06
 Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 10/148 (6%)

Query: 39  AIDWHTIITLSGLMLLTKGVELSGYFDVLGRKM---VRRFATERRLAMFMVLAAALLSTF 95
           +ID   ++ L+ L+ ++  +  SG  +++   +    +       L M ++ A A+ + F
Sbjct: 443 SIDGPILVMLAALIPVSDSLRTSGASELIAGWLGSAAQGLPPFAALGMILLTAMAV-TPF 501

Query: 96  LTNDVALFIVVPLTITLKRLCEIPVNRLIIFEALAVNAG-SLLTPIGNPQNILIWGRSGL 154
           L N   + ++ P+               ++  A+A+ AG   LTPIG+  N L+ G  G 
Sbjct: 502 LNNAATVLVMAPIAAGFATTLGFRPEAFLM--AVAIGAGCDFLTPIGHQCNTLVMGPGGY 559

Query: 155 SFAGFIAQMAPLAGAMMLT---LLLLCW 179
            F+ +     PL+  +++    +LL  W
Sbjct: 560 RFSDYPRLGLPLSIMIVIASIPMLLYVW 587