Pairwise Alignments

Query, 716 a.a., ATP-dependent DNA helicase (NCBI) from Escherichia coli BW25113

Subject, 636 a.a., ATP-dependent helicase from Erwinia amylovora T8

 Score =  179 bits (455), Expect = 3e-49
 Identities = 193/702 (27%), Positives = 299/702 (42%), Gaps = 120/702 (17%)

Query: 17  ALQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQ 76
           AL + IP F PR PQR+M A VA+ +  E    L +EA TG GKT +YL P +       
Sbjct: 10  ALAQAIPGFRPREPQREMAAAVARAI--ENKSELVVEAGTGTGKTYAYLAPALRCG---- 63

Query: 77  KTLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAF----GRGRYVCPRNLTALASTEP 132
           K ++VST + ALQDQ+YS+DLP + K    LK+  +     GR  Y+C   L  L     
Sbjct: 64  KKVIVSTGSKALQDQLYSRDLPTVAKA---LKYKGSMALLKGRSNYLC---LERLEQQSM 117

Query: 133 TQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKA 192
              DL      +L        +    + GD+ T           +A D  +W  +++   
Sbjct: 118 AGGDLAVQAMSDLVHLRGWSNET---VDGDISTCG--------GVAEDSIIWPLVTSTND 166

Query: 193 SCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESE-----AVLPDPKNLLLVL 247
           +CL  +C  Y++C    ARR+  +A+VVV NH L +A M  +      ++PD    +++ 
Sbjct: 167 NCLGSDCPQYQDCFVVKARRKAMDADVVVVNHHLFLADMVVKEGGFAELIPDAD--VMIF 224

Query: 248 DEGHHLPDVA----------RDALEMSAEITAPWYRL------QLDLFTKLVATCMEQFR 291
           DE H +PD+A          R  L+++ +IT   YR       QL      +A   + FR
Sbjct: 225 DEAHQVPDIASQYFGQQLSSRQLLDLAKDITLA-YRTEIRDSQQLQKAADRLARSAQDFR 283

Query: 292 PKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQR 351
                P                   +L ++L       ++A  + A+  L D+ LE+C  
Sbjct: 284 LSLGDP---------------GFRGNLRDLL-------RDANIQRAL-LLLDDALELCFD 320

Query: 352 LAKLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQS 411
           +AKL+     L +           + +   L+R                +L RL  ++Q 
Sbjct: 321 VAKLSLGRSALLD----------AAFERAALYR---------------GRLKRLKDVSQP 355

Query: 412 SGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRL 471
                + W     R    H       + VSD+    +       I TSATL      +  
Sbjct: 356 G---FSYWYECNAR----HFVLALTPLSVSDRFREAIDERPASWIFTSATLAVNEQMAHF 408

Query: 472 QEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVEPSIDNEEQHIAEMAAFFRKQVES 531
            E  G+ +      + L SPF+   Q  + +PR    P   N+     ++A   R  +E+
Sbjct: 409 VERLGVGQAEA---LILSSPFDFARQALLCVPRHLPSP---NQPGGARQLARMLRPLIEA 462

Query: 532 KKHLGMLVLFASGRAMQRFL--DYVTDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLV 589
               G      +   + R L  ++   L L +L+QG+  + +L+    K+      ++LV
Sbjct: 463 NN--GRCFFLCTSHQVMRDLAAEFRATLALPVLLQGETSKGQLL----KQFVAAGNALLV 516

Query: 590 GLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFN 649
              SF EG+D++GD LS V I K+ F   D P++    E  K     PF    LP A   
Sbjct: 517 ATSSFWEGVDVRGDALSLVIIDKLPFTSPDDPLLKARMEDCKVRGGDPFAEVQLPDAVIT 576

Query: 650 LIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKRLLDALPVFP 691
           L Q VGRLIR     G +VI D RL+ + YG   +++LP  P
Sbjct: 577 LKQGVGRLIRDVNDRGVLVICDNRLVMRPYGAVFVNSLPPTP 618