Pairwise Alignments

Query, 379 a.a., cytochrome d terminal oxidase, subunit II (NCBI) from Escherichia coli BW25113

Subject, 378 a.a., Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  446 bits (1146), Expect = e-130
 Identities = 210/379 (55%), Positives = 271/379 (71%), Gaps = 1/379 (0%)

Query: 1   MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGN 60
           M+DYE LRFIWWLL+GV+L+ F VTDGFDMGVG L   + RND ERR++INS+  HW+GN
Sbjct: 1   MLDYETLRFIWWLLIGVILVAFMVTDGFDMGVGCLLPLIARNDDERRVLINSVGAHWEGN 60

Query: 61  QVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWD 120
           QVWLI AGGALFAAWP VYAAAFSGFYVAMILVL +LFFRP+ FDYR KI   RWR +WD
Sbjct: 61  QVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCALFFRPLAFDYRGKIANARWRALWD 120

Query: 121 WGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMI 180
            G+ IGS VPP+V G+AFGNL  GVPF     L + Y G F+QLL+PF LL G++S+ ++
Sbjct: 121 TGLVIGSLVPPVVFGIAFGNLFLGVPFAFTPQLHVDYFGTFWQLLSPFALLCGLLSLSLV 180

Query: 181 ITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAA 240
           I QG  +LQ++T G +  R  +  + +AL+ ++CF LAG W+  G+DG+V+  T D    
Sbjct: 181 IMQGGVWLQLKTEGVIRQRALSATRYSALLIVICFLLAGYWLWAGVDGFVL-LTQDANGP 239

Query: 241 SNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLA 300
           SNPL K V    GAW+ +F  +P+L  IP LG++LP+L        +    F+F+SLT A
Sbjct: 240 SNPLLKGVAILPGAWMNHFIRSPLLLIIPLLGMILPILAFYACLRGQTIRGFLFASLTQA 299

Query: 301 CIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYW 360
           C+I TAGI +FPFVMPSS    +SLT+WD+TSSQ+TL +M  + ++ +PI+LLYT W Y+
Sbjct: 300 CVIFTAGITLFPFVMPSSVSPLSSLTVWDSTSSQMTLEIMLVIVLIFLPIVLLYTLWSYY 359

Query: 361 KMFGRITKEDIERNTHSLY 379
           KM GRI    + RN H LY
Sbjct: 360 KMLGRINLGTLRRNDHELY 378