Pairwise Alignments

Query, 379 a.a., cytochrome d terminal oxidase, subunit II (NCBI) from Escherichia coli BW25113

Subject, 338 a.a., cytochrome d oxidase, subunit II (cydB) from Kangiella aquimarina DSM 16071

 Score =  166 bits (421), Expect = 7e-46
 Identities = 109/365 (29%), Positives = 184/365 (50%), Gaps = 40/365 (10%)

Query: 2   IDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGNQ 61
           IDY +   IW  L+   ++ + + DGFD+G+G+L  F+ +N T++   +NS+AP WDGN+
Sbjct: 7   IDYAM---IWAGLIAFAVLAYIILDGFDLGIGILFPFI-KNKTDQETAMNSVAPIWDGNE 62

Query: 62  VWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWDW 121
            WL+  GG LFA +P+ Y+      Y+ +IL+L  L FR V F++  + + +  ++ WD 
Sbjct: 63  TWLVLGGGGLFAVFPLAYSVIMPALYMPIILMLLGLIFRGVAFEFHWRTKNS--QDWWDR 120

Query: 122 GIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMII 181
           G F+GS V  L  G+A G L+QG+           Y G ++  L PF +  G+  V   +
Sbjct: 121 GFFLGSLVATLCQGIALGALVQGI-----TVADRAYAGGWWDWLTPFSITTGIALVVGYV 175

Query: 182 TQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAAS 241
             GAT+L M+T   L  ++   A++AA +TL    +  +W+++    Y+ +     + A 
Sbjct: 176 LLGATWLNMKTTDGLQKQSVQFAKIAAWLTLFFIGIISLWMIFIEQQYLHR----WFDAP 231

Query: 242 NPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLAC 301
           N     VV  A    V F    +L+ +     V P L  +          FV S + L  
Sbjct: 232 NVYYLMVVPVA----VLFCGFKLLYGLHKSREVSPFLYAIA--------LFVLSYIGLL- 278

Query: 302 IILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYWK 361
                 I+ +P ++P       S+++W A +   +L  +   A  L+PII+ YT++ YW 
Sbjct: 279 ------ISFYPNLVP------PSISIWQAAAPDDSLKFLLVGASALLPIIIGYTSYAYWV 326

Query: 362 MFGRI 366
             G++
Sbjct: 327 FRGKV 331