Pairwise Alignments

Query, 379 a.a., cytochrome d terminal oxidase, subunit II (NCBI) from Escherichia coli BW25113

Subject, 335 a.a., cytochrome d ubiquinol oxidase subunit II from Dickeya dadantii 3937

 Score =  159 bits (401), Expect = 1e-43
 Identities = 113/370 (30%), Positives = 170/370 (45%), Gaps = 48/370 (12%)

Query: 7   LRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGNQVWLIT 66
           L  IW+ ++    + + V DGFD+G+GML  F  R+  +R +M+N++AP WDGN+ WL+ 
Sbjct: 5   LSVIWFAIIIFATLMYIVMDGFDLGIGMLFPF-HRHAADRDLMVNTVAPVWDGNETWLVL 63

Query: 67  AGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWDWGIFIG 126
            G  LF A+P+ YA       + + L+L  L FR V F++R K   +  R  WD     G
Sbjct: 64  GGAGLFGAFPLAYAVIVDALTIPLTLMLVGLIFRGVAFEFRFKATPSH-RPFWDQAFMWG 122

Query: 127 SFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMIITQGAT 186
           S V     GV  G +L G      E    +++G     L PF L  GV  V      G T
Sbjct: 123 SLVATFFQGVTVGAVLNGF-----EVTDRHFSGPVLGWLTPFSLFCGVGLVVAYALLGCT 177

Query: 187 YLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAASNPLNK 246
           +L M+T  ELH R  A A    +  L    +  +W                     PL  
Sbjct: 178 WLIMKTGQELHRRMSALAPSLVVALLAVIVVISLW--------------------TPLAH 217

Query: 247 EVVREAGAWLVN---FNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLACII 303
             +++    L N   F   P+L A  A+G+      I   R       F+   LTLA I 
Sbjct: 218 PAIKQRWFSLPNLFWFLPVPLLVAACAVGI------IRGVRRHAHYSPFL---LTLALIF 268

Query: 304 L---TAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYW 360
           L     GI+++P ++P       SLT+WDA +   +   M   A++++P+IL YT W Y+
Sbjct: 269 LGFTGLGISLWPMIIP------PSLTLWDAAAPAQSQGFMLVGALLIIPVILGYTFWSYY 322

Query: 361 KMFGRITKED 370
              G++  ++
Sbjct: 323 VFRGKVRPDE 332