Pairwise Alignments

Query, 379 a.a., cytochrome d terminal oxidase, subunit II (NCBI) from Escherichia coli BW25113

Subject, 333 a.a., cytochrome d ubiquinol oxidase subunit II from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  169 bits (428), Expect = 1e-46
 Identities = 112/360 (31%), Positives = 163/360 (45%), Gaps = 37/360 (10%)

Query: 7   LRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGNQVWLIT 66
           L  +W  L+   +  + V DGFD+GVG+L   L   D   + M NSIAP WDGN+ WLI 
Sbjct: 5   LTLVWAGLLAFAVFAYIVMDGFDLGVGILFPTLKAGDQRDKAM-NSIAPVWDGNETWLIL 63

Query: 67  AGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWDWGIFIG 126
            GG LFAA+P+ YA      Y  +I +L  L FR V F+YR +    R + +WD   F G
Sbjct: 64  GGGGLFAAFPLAYAVLMPAVYTPIIAMLLGLVFRGVAFEYRWR--TVRAKPIWDVAFFGG 121

Query: 127 SFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMIITQGAT 186
           S +     GV  G +LQGV     E     Y G  +  L+PF LL G   V      GAT
Sbjct: 122 SLLAAFSQGVTLGAILQGV-----EVSGRAYGGGSWDWLSPFSLLTGAAVVVGYALLGAT 176

Query: 187 YLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAASNPLNK 246
           +L M+T G L    R+ A      TL+      +   + +DG   +   D          
Sbjct: 177 WLNMKTEGALQTHARSQAWKLGPATLLMIGAVSLATPF-LDGEYARRWFD---------- 225

Query: 247 EVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLACIILTA 306
                       +    +   +P L +++      T R  +  W F+ S    A      
Sbjct: 226 ------------WPGVLLTAQVPLLVLIVAAAFFWTMRQKREVWPFLLSLGLFAVTFAGL 273

Query: 307 GIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYWKMFGRI 366
           G+++FP+ +P        +T+W A +   +   M   A++L+PIIL YTA+ YW   G++
Sbjct: 274 GVSVFPYAVPD------EITLWQAAAPASSQLFMLVGALILIPIILAYTAYAYWVFRGKV 327