Pairwise Alignments

Query, 493 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

Subject, 485 a.a., dipeptide/tripeptide permease DtpC from Escherichia coli ECRC98

 Score =  537 bits (1383), Expect = e-157
 Identities = 274/474 (57%), Positives = 343/474 (72%), Gaps = 10/474 (2%)

Query: 3   KHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYNDTHAYELFSAYCSLVYVTP 62
           K  SQPRAIYY+VA+QIWEYFSFYGMRALLILYLT+QL ++D HA  LFSAY SLVYVTP
Sbjct: 2   KTPSQPRAIYYIVAIQIWEYFSFYGMRALLILYLTHQLGFDDNHAISLFSAYASLVYVTP 61

Query: 63  ILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVS 122
           ILGG+LAD++LGNR AV+ GALLM +GHVVLG        LYL+LAII+CGYGLFKSN+S
Sbjct: 62  ILGGWLADRLLGNRTAVIAGALLMTLGHVVLGIDTNSTFSLYLALAIIICGYGLFKSNIS 121

Query: 123 CLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGL 182
           CLLGELY+  D RRDGGFSL+YAAGN+GSI APIACG A + Y W +GF LA  GM  GL
Sbjct: 122 CLLGELYDENDHRRDGGFSLLYAAGNIGSIAAPIACGLAAQWYGWHVGFALAGGGMFIGL 181

Query: 183 VIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITILFWKEWSVYALIV 242
           +IFL G+RHF  TR ++KK L +  F LP W WL+V+L   P   T+L   +WS Y L +
Sbjct: 182 LIFLSGHRHFQSTRSMDKKALTSVKFALPVWSWLVVMLCLAPVFFTLLLENDWSGYLLAI 241

Query: 243 ATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRD 302
             +I   ++A++  K    + R+ L  IV L F   LFW  AQQGGS+ISL+IDRFVNR 
Sbjct: 242 VCLIAAQIIARMMIKF--PEHRRALWQIVLLMFVGTLFWVLAQQGGSTISLFIDRFVNRQ 299

Query: 303 MFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCIL 362
            F   VPTA+FQS+NA AVML GV LAW+      GN T+R+W KFA GL LM+ GF +L
Sbjct: 300 AFNIEVPTALFQSVNAIAVMLAGVVLAWLASPESHGNSTLRVWLKFAFGLLLMACGFMLL 359

Query: 363 TLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLS 422
              AR +A  G +S+ +MV GLA+MGFAELFIDPVA++QITR++   ++GVLTGIYML +
Sbjct: 360 AFDARHAAADGQASMGVMVSGLALMGFAELFIDPVAIAQITRLK---MSGVLTGIYMLAT 416

Query: 423 GAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALACVGLVLMI 476
           GA+AN+LAGV+A QT+++          +I AY   F Q+    LACV +++++
Sbjct: 417 GAVANWLAGVVAQQTTESQIS-----GMAIAAYQRFFSQMGEWTLACVAIIVVL 465