Pairwise Alignments

Query, 468 a.a., predicted outer membrane porin (NCBI) from Escherichia coli BW25113

Subject, 427 a.a., porin from Pseudomonas simiae WCS417

 Score = 57.8 bits (138), Expect = 7e-13
 Identities = 80/364 (21%), Positives = 137/364 (37%), Gaps = 44/364 (12%)

Query: 9   STLALAIAGVTAMSGFMAMPEARAEGFIDDSTLTGGIYYWQRERDRKDVTDGDKYKTNLS 68
           +TL L + GV  MSG +    A+A+ FI DS     +  +   RD ++     K +    
Sbjct: 4   NTLNLILKGVGLMSGGLLCAPAQAD-FIKDSKADLDLKNYYFNRDYREDAGQSKREEWAQ 62

Query: 69  HSTWNANLDFQSGYAADMFGLDIAAFTAIEMAENGDSSH-----------PNEIAFSKSN 117
               N    F  G     FG+D+     +++  + D S            P + ++SK  
Sbjct: 63  GFILNLKSGFTEGTVG--FGVDVVGMLGLKLDSSPDRSGSGLLSRDNDATPGKPSYSK-- 118

Query: 118 KAYDEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAG 177
           +A+DE         S Y    K ++     R+GY+ P   TL        P T++G +  
Sbjct: 119 RAHDE--------YSKYGVTGKVRFAQSELRSGYLLPDLPTLQPNTSRLFPQTFRGTQVT 170

Query: 178 ANFDYGDAGALSFSYMWTNEYKAPWHLEMDEFYQND---KTTKVDYLHSFGAKYDFKNNF 234
           +  D      +      T + ++  + +M    Q+     T K D     G  Y      
Sbjct: 171 ST-DIAGLALIGGQIDQTKQRESTEYEDMGLTSQSGAYKSTAKSDRFRFAGGDYKLTPGM 229

Query: 235 VLEAAFGQAEGYIDQYFAKASYKFDIAGSPLTTSYQFY-------GTRDKVDDRSVNDLY 287
            L   F Q E    Q+F      F + G  L T  +++       G   KVD+R+++   
Sbjct: 230 TLSYHFAQLEDIYQQHFVGLKNSFALGGGTLKTDIRYFDADKSGAGLAGKVDNRALSTRA 289

Query: 288 DGTAWLQALTFGYRAADVVDLRLEGTWVKADGQQGY-FLQRMTPTYASSNGRLDIWWDNR 346
             +    +L  GY+     +   +  +   DG   Y F +     ++ +N R+   W  R
Sbjct: 290 MFSYKGHSLGGGYQ-----EQYGDTPFTYVDGTNTYLFSEYQLSNFSQTNERV---WHAR 341

Query: 347 SDFN 350
            DF+
Sbjct: 342 YDFD 345