Pairwise Alignments

Query, 468 a.a., predicted outer membrane porin (NCBI) from Escherichia coli BW25113

Subject, 468 a.a., N-acetylglucosamine-regulated outer membrane porin from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  917 bits (2371), Expect = 0.0
 Identities = 427/468 (91%), Positives = 452/468 (96%)

Query: 1   MRTFSGKRSTLALAIAGVTAMSGFMAMPEARAEGFIDDSTLTGGIYYWQRERDRKDVTDG 60
           MRTFSGKRSTLALAIAG+TAMSG++ +P+A+A GF DDSTLTGGIYYWQRERDRKDVTDG
Sbjct: 1   MRTFSGKRSTLALAIAGITAMSGWIVVPQAQASGFFDDSTLTGGIYYWQRERDRKDVTDG 60

Query: 61  DKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAENGDSSHPNEIAFSKSNKAY 120
           DKYKTNLSH+TWNANLDFQSGYAADMFGLDIAAFTAIEMAENGDS HPNEIAFSK NK Y
Sbjct: 61  DKYKTNLSHATWNANLDFQSGYAADMFGLDIAAFTAIEMAENGDSGHPNEIAFSKKNKGY 120

Query: 121 DEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAGANF 180
           DED+SGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAGA+F
Sbjct: 121 DEDYSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAGASF 180

Query: 181 DYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTTKVDYLHSFGAKYDFKNNFVLEAAF 240
           DYGDAGALSFSYMWTNEYKAPWH EMD+FYQ DK T VDYLHS GAKYDFKN+ VLEAAF
Sbjct: 181 DYGDAGALSFSYMWTNEYKAPWHTEMDKFYQADKKTNVDYLHSIGAKYDFKNDLVLEAAF 240

Query: 241 GQAEGYIDQYFAKASYKFDIAGSPLTTSYQFYGTRDKVDDRSVNDLYDGTAWLQALTFGY 300
           GQ+EGY+DQYFAKASYKFD+ G+P TTSYQFYG RDKVDDRSVND+YDGTAWLQALTFGY
Sbjct: 241 GQSEGYVDQYFAKASYKFDLGGNPFTTSYQFYGARDKVDDRSVNDIYDGTAWLQALTFGY 300

Query: 301 RAADVVDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFG 360
           + A+VVDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFG
Sbjct: 301 KVAEVVDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFG 360

Query: 361 AMYDLKNWNLPGFAIGASYVYAWDAKPATWQSNPDAYYDKNRTIEESAYSLDAVYTIQDG 420
           AMYDLKNWNLPG+A+GASYVYAWDAKPATWQSNPDAYYDKNRTIEES+YSLDAVYT+Q+G
Sbjct: 361 AMYDLKNWNLPGWAVGASYVYAWDAKPATWQSNPDAYYDKNRTIEESSYSLDAVYTLQEG 420

Query: 421 RAKGTMFKLHFTEYDNHSDIPSWGGGYGNIFQDERDVKFMVIAPFTIF 468
           RAKGTMFKLHFTEYDNHS+IPSWGGGYGNIFQDERDVKF+VIAPFTIF
Sbjct: 421 RAKGTMFKLHFTEYDNHSNIPSWGGGYGNIFQDERDVKFIVIAPFTIF 468