Pairwise Alignments

Query, 555 a.a., membrane protein FdrA (NCBI) from Escherichia coli BW25113

Subject, 513 a.a., Succinyl-CoA synthetase, alpha subunit from Enterobacter asburiae PDN3

 Score =  327 bits (839), Expect = 5e-94
 Identities = 201/508 (39%), Positives = 287/508 (56%), Gaps = 27/508 (5%)

Query: 6   IKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDIC 65
           IKK  + DSVSLM +S K ++   V+   V M T  NK +L   G    +   A   D+ 
Sbjct: 7   IKKNTYFDSVSLMSVSTKANKLPGVEQAFVAMATEMNKGVLKNLGLLTPELAEAKNGDLM 66

Query: 66  VAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDANLALISV 125
           + I+ +AA+     AI     EAL    +  G+ +A  +     SA    P++NLA+ISV
Sbjct: 67  IVIKGDAANDETLAAI-----EALFTRKESGGTHEA--RYATIASAKTHRPESNLAVISV 119

Query: 126 AGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPL 185
            G +AA  A QAL+ +LNVM+FSDNV+L+DE+ LK  A +KGLL+MGPDCGT++I G  L
Sbjct: 120 NGTFAAREARQALENDLNVMLFSDNVSLDDELALKQLAHKKGLLMMGPDCGTAIINGAGL 179

Query: 186 AFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALE 245
            FAN +  G IG++GASGTG QEL  +I   G G++  IG GGRDLS ++GG+  L A++
Sbjct: 180 CFANAVRSGPIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDAID 239

Query: 246 MLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSL 305
           ML ADE + V+A +SKPPA AV  K++   +A  KP V  FLG +   A ++ + FA   
Sbjct: 240 MLEADEDTLVIALISKPPAPAVAEKVLARARACRKPVVVCFLGRSEPPADEDGLQFARGT 299

Query: 306 DEAARLACLLSRVTARRNAIAPVS--------------SGFICGLYTGGTLAAEA----- 346
            EAA  A LL+ +      + P++                +I GL+ GGTL  EA     
Sbjct: 300 KEAALKAVLLNGIKKESLDLHPLNWPLIEEVRARLTPQQKYIRGLFCGGTLCDEAMFAAL 359

Query: 347 AGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGA 406
           A     +  ++ D   +   +  + +H  +D GDD +T G+PHPMIDPT R   +     
Sbjct: 360 AKFDDVYSNIQPDPAKRLSDISVSKAHTFLDFGDDDFTNGKPHPMIDPTNRISRLLQEAR 419

Query: 407 KPQVRVLLLDVVIGFGATADPAASLVSAWQKACA-ARLDNQPLYAIATVTGTERDPQCRS 465
            P+V V+++D V+GFGA  DP   ++ A ++A A A+ DN+PL  +  V GT++DPQ  +
Sbjct: 420 DPEVGVIVMDFVLGFGAHEDPVGVMIDAIKEAQAIAKADNRPLEILGYVLGTDQDPQSLA 479

Query: 466 QQIATLEDAGIAVVSSLPEATLLAAALI 493
           QQ   L DAG+   SS     LLA   +
Sbjct: 480 QQCQLLTDAGVIWASSSTNTGLLAREFV 507