Pairwise Alignments

Query, 430 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

Subject, 468 a.a., Lysine-specific permease from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 79.3 bits (194), Expect = 2e-19
 Identities = 80/348 (22%), Positives = 150/348 (43%), Gaps = 33/348 (9%)

Query: 17  NVVSIGIGAMVGAGIFALLGQA-ALLMEASTWVAFAFGGIVAMFSGYAYARLGASYPSNG 75
           +++ + +G  +G G+F  + +  + +  A T +A+ F G + + +      L  ++P +G
Sbjct: 24  HLLMMSLGGTIGTGLFIGIAEPLSSVGPAGTLLAYLFAGTIMLATMMCLGELSCAFPHSG 83

Query: 76  GIIDFFRRGLGNGVFSLALSLLYLLTLAVSIAMVARAFGAYAVQFLHEGSQEEHLILLYA 135
               +    + +  +S  +  LY  +   S+A    A G  A QF          + ++ 
Sbjct: 84  SFQHYALMFMPSPCWSYTIGWLYWFSWVFSLAADLTAAGFIAHQFFPAVP-----VYMFC 138

Query: 136 LGIIAVMTLFNSLSNHAVGRLEVILVGIKMMILLLLIIAG---VWSLQPAHISVSAPPSS 192
           L I+ ++T  N  S  + G  E  L  IK+  ++L I AG   ++SL           + 
Sbjct: 139 LAILLILTAINLTSAKSFGECEYWLSAIKVFAIVLFICAGGVMIYSLMGHSDWHPTLKTD 198

Query: 193 GAFFS--------CIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGVTTLLYISL 244
           G +F          + I   ++ G  ++ NAA + + P +I+P+  L  IG+  +L+  L
Sbjct: 199 GMWFPHGWEQIVVYMTIVIYSFQGVELVGNAAGETESPHIILPKVIL-GIGLRIILFYGL 257

Query: 245 ALVLLSDVSALELEKYADTAVAQAASPLLGHVGY----VIVVIGALLATASAINANLFAV 300
           A+ +L+ V   EL     +      S    H G      ++ +    A  SA N+ ++A 
Sbjct: 258 AIAVLALVYPHELTPNGQSPFVWVFS----HAGIPGADTLMTLVIFSAAVSAANSAIYAS 313

Query: 301 FNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVVLIMLMTAALNLGSL 348
             ++ +M  +R  P    K     +  G   V V  +L+TA L L SL
Sbjct: 314 SRMLWSMAGDRFAPACFGK-----TNGGG--VPVYAILITALLALVSL 354