Pairwise Alignments

Query, 215 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

Subject, 209 a.a., Transcriptional regulator, AcrR family from Pseudomonas sp. S08-1

 Score =  113 bits (283), Expect = 2e-30
 Identities = 65/186 (34%), Positives = 105/186 (56%), Gaps = 4/186 (2%)

Query: 3   RKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVTRGAIYWHFKDKSDLFSEI 62
           R+TK++A++TR  I+  A +LF ++GV+ ++L +IA+AAGVTRGA+YWHF++K+ LF E+
Sbjct: 2   RRTKEQAEQTRIAIMAAAEQLFLEKGVAHSTLEQIARAAGVTRGAVYWHFENKAHLFHEM 61

Query: 63  WELSESNIGELELEYQAKFPG--DPLSVLREILIHVLESTVTEERRRLLMEIIFHKCEFV 120
             LS+  +   +L  +    G  DPL  LR++ I  + +   +E+RR +  I+ H+CEF 
Sbjct: 62  --LSQVRLPPEQLTERLSGCGGADPLLSLRDLCIEAIANLARDEQRRRIFTILLHRCEFT 119

Query: 121 GEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMTRRAAIIMRGYISGLMENWLF 180
            E+   +Q       +    +EQ        + L   +  R AA  +   I GL  +W  
Sbjct: 120 DELREAEQRHNAFVSQFIGLVEQLFARPACRERLLPGMTPRLAARALHAQIIGLFTDWTR 179

Query: 181 APQSFD 186
            PQ FD
Sbjct: 180 DPQLFD 185