Pairwise Alignments

Query, 1049 a.a., multidrug efflux system protein (NCBI) from Escherichia coli BW25113

Subject, 1064 a.a., efflux RND transporter permease subunit from Paraburkholderia sabiae LMG 24235

 Score = 1390 bits (3597), Expect = 0.0
 Identities = 696/1052 (66%), Positives = 858/1052 (81%), Gaps = 5/1052 (0%)

Query: 1    MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDT 60
            M  FFIDRPIFAWVIAII+MLAG  +I  LPVAQYPTIAPPAV ISA+YPGA AKTV++T
Sbjct: 1    MAKFFIDRPIFAWVIAIILMLAGLASIFTLPVAQYPTIAPPAVQISATYPGASAKTVENT 60

Query: 61   VTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQ 120
            VTQVIEQ M+G+D+L+Y+SS SD +GT  ITLTF +GT+ DIAQVQVQNKLQLA PLLPQ
Sbjct: 61   VTQVIEQQMSGLDHLLYLSSTSDDSGTATITLTFAAGTNPDIAQVQVQNKLQLATPLLPQ 120

Query: 121  EVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGS 180
             VQQ G  V KSSSSFL+V+  ++TDG+MT+ D+++YVA+N++D +SR  GVG V LFGS
Sbjct: 121  VVQQLGTKVTKSSSSFLLVMAFVSTDGSMTKYDLANYVASNVQDPVSRIDGVGTVTLFGS 180

Query: 181  QYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL 240
            QYAMRIW++ ++L  F LTPVDV TA++AQN QVA G LGGTP + GQ L A+I   T L
Sbjct: 181  QYAMRIWLDAHKLTNFGLTPVDVETALQAQNVQVAGGSLGGTPSIPGQLLQATISEATLL 240

Query: 241  TSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANAL 300
            T+ E+FG +LLKVNQDGS+V ++DVA+IELGGENY+   ++NGQP +G GI+LATGANAL
Sbjct: 241  TTPEQFGNVLLKVNQDGSQVRIKDVARIELGGENYNFDTKYNGQPTAGFGIQLATGANAL 300

Query: 301  DTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ 360
             TA A+R ++ ++  +FP GL + YPYDTTPFV++SI EVVKTL+E I+LVFLVMYLFLQ
Sbjct: 301  ATAKAVRDKIDQLSKYFPHGLVVKYPYDTTPFVRLSIEEVVKTLLEGIVLVFLVMYLFLQ 360

Query: 361  NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM 420
            N RATLIPTIAVPVVLLGTFA+++A GFSIN L+MFG+VLAIGLLVDDAIVVVENVERVM
Sbjct: 361  NLRATLIPTIAVPVVLLGTFAIMSAVGFSINVLSMFGLVLAIGLLVDDAIVVVENVERVM 420

Query: 421  AEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL 480
            +EEGL P+EATRK+M QI GAL+G+A+VLSAVFVP+AF GGS GAIYRQFS+TIV+AM L
Sbjct: 421  SEEGLSPREATRKAMDQITGALIGVALVLSAVFVPVAFSGGSVGAIYRQFSLTIVAAMVL 480

Query: 481  SVLVALILTPALCATMLKPIAKGDHGEGKKGFFGWFNRMFEKSTHHYTDSVGGILRSTGR 540
            SVLVALILTPALCAT+LKPI K DH E KKGFFGWFNR F+KS   Y   V  +++ +GR
Sbjct: 481  SVLVALILTPALCATILKPIPK-DHHEEKKGFFGWFNRTFDKSRDKYHSGVHHVIKRSGR 539

Query: 541  YLVLYLIIVVGMAYLFVRLPSSFLPDEDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLT 600
            +L++YL+++V +  LFVRLP SFLPDEDQG    +VQ P+G+TQE T + L +++ + L 
Sbjct: 540  WLIIYLVVIVAVGLLFVRLPKSFLPDEDQGTMFVLVQTPSGSTQETTARALKDISDWLLN 599

Query: 601  KEKNNVESVFAVNGFGFAGRGQNTGIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKD 660
             EK+ VES F VNGF FAGRGQN+G+ FV +KD+A+R   + KV+A+  R    F+  K+
Sbjct: 600  DEKSIVESTFTVNGFSFAGRGQNSGLVFVRMKDYAERQHADQKVQALVGRMYMHFAGYKN 659

Query: 661  AMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNG 720
            A+VF  N P+I ELGTA+GFDFEL D+AGLGHEKL  ARNQLL  A+K P ML  VRPNG
Sbjct: 660  AVVFPVNPPSIPELGTASGFDFELQDRAGLGHEKLMAARNQLLGMASKDP-MLAQVRPNG 718

Query: 721  LEDTPQFKIDIDQEKAQALGVSINDINTTLGAAWGGSYVNDFIDR-GRVKKVYVMSEAKY 779
            L DTPQFK+ ID EKA A GVS+  I+ T   AW  +YVN+F+D   R+KKVY+ ++A +
Sbjct: 719  LNDTPQFKVSIDHEKAAAQGVSLATIDQTFSIAWASAYVNNFLDTDSRIKKVYLQADAPF 778

Query: 780  RMLPDDIGDWYVRAADGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGE 839
            RM P+++ DWYVR   G MVPFSAF+S +W YGSP+LERYNG+ ++EI GQA+PGKSTG+
Sbjct: 779  RMTPENLSDWYVRNTAGSMVPFSAFASGQWTYGSPKLERYNGISAVEIQGQASPGKSTGQ 838

Query: 840  AMELMEQLASKLPTGVGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPF 899
            AM  ME LA+KLP G+GY+WTG+S+QER SG+QAP LY IS++VVFLCLAALYESWSIPF
Sbjct: 839  AMTAMEALAAKLPAGIGYEWTGLSFQERQSGSQAPILYGISILVVFLCLAALYESWSIPF 898

Query: 900  SVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKG 959
            SV++VVPLGV+GALLAAT RGL NDV+FQVGLLTT+GLSAKNAILIVEFA++L   EG G
Sbjct: 899  SVIMVVPLGVLGALLAATLRGLENDVFFQVGLLTTVGLSAKNAILIVEFARELQQGEGMG 958

Query: 960  LIEATLDAVRMRLRPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAI 1019
             +EA L+A R+RLRPILMTSLAFILGV+PL IS GAGS +Q+A+GTGV+GGM+TAT LAI
Sbjct: 959  PVEAALEAARLRLRPILMTSLAFILGVLPLAISNGAGSASQHAIGTGVIGGMLTATFLAI 1018

Query: 1020 FFVPVFFVVVRRRFSRKNEDIEHS--HTVDHH 1049
            F +P+FFVV+R +F+   ED + +  H  +HH
Sbjct: 1019 FMIPMFFVVIRAKFTGDKEDPDEAMKHYNEHH 1050