Pairwise Alignments

Query, 1049 a.a., multidrug efflux system protein (NCBI) from Escherichia coli BW25113

Subject, 1037 a.a., aminoglycoside/multidrug efflux system (NCBI) from Escherichia coli BW25113

 Score = 1351 bits (3496), Expect = 0.0
 Identities = 685/1036 (66%), Positives = 836/1036 (80%), Gaps = 3/1036 (0%)

Query: 1    MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDT 60
            M NFFIDRPIFAWV+AI++ L G LAI  LPV QYP +APP V ++A+YPGA A+T+++T
Sbjct: 1    MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENT 60

Query: 61   VTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQ 120
            VTQVIEQNM G+DNLMYMSS S  TG   +TL+F++GTD D A  QVQN+LQ AM  LPQ
Sbjct: 61   VTQVIEQNMTGLDNLMYMSSQSSGTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQ 120

Query: 121  EVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGS 180
             VQ QGV+V K+  + ++ +  ++TDG+M ++DI+DYVA+N++D +SR +GVGD+  +GS
Sbjct: 121  AVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVASNIQDPLSRVNGVGDIDAYGS 180

Query: 181  QYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL 240
            QY+MRIW++P +LN FQ+T  DV  AI++QNAQ+A GQLGGTP V  Q LNA+I AQ+ L
Sbjct: 181  QYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLGGTPSVDKQALNATINAQSLL 240

Query: 241  TSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANAL 300
             + E+F  I L+VNQDGS V L DVA +E+G E YD ++ FNG+PASGLG+KLA+GAN +
Sbjct: 241  QTPEQFRDITLRVNQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEM 300

Query: 301  DTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ 360
             TA  +   L ++  +FP GL+    Y+TT FVK SI +VVKTL+EAI LVFLVMYLFLQ
Sbjct: 301  ATAELVLNRLDELAQYFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQ 360

Query: 361  NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM 420
            NFRATLIPTIAVPVVL+GTF+VL AFG+S+NTLTMF MVLAIGLLVDDAIVVVENVER+M
Sbjct: 361  NFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVLAIGLLVDDAIVVVENVERIM 420

Query: 421  AEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL 480
            +EEGL P+EATRKSMGQIQGALVGIAMVLSAVFVPMAFFGG+TGAIYRQFSITIV+AM L
Sbjct: 421  SEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVL 480

Query: 481  SVLVALILTPALCATMLKPIAKGDHGEGKKGFFGWFNRMFEKSTHHYTDSVGGILRSTGR 540
            SVLVA+ILTPALCAT+LKP+ KG+H  G+KGFF WFN+MF ++   Y   V  IL  + R
Sbjct: 481  SVLVAMILTPALCATLLKPLKKGEH-HGQKGFFAWFNQMFNRNAERYEKGVAKILHRSLR 539

Query: 541  YLVLYLIIVVGMAYLFVRLPSSFLPDEDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLT 600
            ++V+Y++++ GM +LF+RLP+SFLP ED+G+F T VQLP+G+TQ++T KV+ ++  YY T
Sbjct: 540  WIVIYVLLLGGMVFLFLRLPTSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFT 599

Query: 601  KEKNNVESVFAVNGFGFAGRGQNTGIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKD 660
             EK+N+ SVFA  G G  G GQN    F+ LKDW++R  +     AI  RAT+AF+QIK+
Sbjct: 600  HEKDNIMSVFATVGSGPGGNGQNVARMFIRLKDWSERDSKTGTSFAIIERATKAFNQIKE 659

Query: 661  AMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNG 720
            A V A + PAI  LG++ GFD EL D AG GH+ L  ARNQLLA AA++P+ LT VR NG
Sbjct: 660  ARVIASSPPAISGLGSSAGFDMELQDHAGAGHDALMAARNQLLALAAENPE-LTRVRHNG 718

Query: 721  LEDTPQFKIDIDQEKAQALGVSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYR 780
            L+D+PQ +IDIDQ KAQALGV+I+DIN TL  AWG SYVNDF+DRGRVKKVYV + A YR
Sbjct: 719  LDDSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYR 778

Query: 781  MLPDDIGDWYVRAADGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEA 840
            MLPDDI  WYVR  DG MVPFSAF++SRWE GSPRLERYNG  ++EI+G+AAPG STG A
Sbjct: 779  MLPDDINLWYVRNKDGGMVPFSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTA 838

Query: 841  MELMEQLASKLPTGVGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFS 900
            M++ME L  +LP G G +WT MSYQERLSG QAP+LYAISL+VVFLCLAALYESWS+PFS
Sbjct: 839  MDIMESLVKQLPNGFGLEWTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFS 898

Query: 901  VMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGL 960
            VMLVVPLGVIGALLA   RGL NDVYFQVGLLT IGLSAKNAILIVEFA + M+++G  L
Sbjct: 899  VMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANE-MNQKGHDL 957

Query: 961  IEATLDAVRMRLRPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIF 1020
             EATL A R RLRPILMTSLAFI GV+P+  STGAGSG Q+AVGTGVMGGM++AT+LAI+
Sbjct: 958  FEATLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIY 1017

Query: 1021 FVPVFFVVVRRRFSRK 1036
            FVP+FFV+VRRRF  K
Sbjct: 1018 FVPLFFVLVRRRFPLK 1033