Pairwise Alignments

Query, 566 a.a., predicted transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 542 a.a., ABC transporter substrate-binding protein from Erwinia tracheiphila SCR3

 Score = 43.1 bits (100), Expect = 3e-08
 Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 36/162 (22%)

Query: 146 HLAGQIFSGLTRFDNNTQRPIGDLAHHWETSTDGLRWDFYLRSTLHWHNGDAVKA----- 200
           ++   +F GL   D   Q P   LA  WETS D + W F+LRS L W +G  + A     
Sbjct: 66  NIINDLFEGLVSIDAGGQ-PRPALAASWETS-DNVTWTFHLRSGLTWSDGSPLTARDVVF 123

Query: 201 --------------------SHLHQRLLMLLQLPALDQLFISV---KRIEVTHPQCLTFF 237
                               +H+   + ++    A DQL I+    + ++VT  Q +++F
Sbjct: 124 SWRRLADPKTASPYASFADYAHIKNAVQVMQGKLAPDQLGITAPDDRTVKVTLEQPVSYF 183

Query: 238 LH---RPDYW--LAHRLASYCSHLAHPQFPLIGTGPFRLTQF 274
           L     P  +    H L  Y      P   ++ +GP++L Q+
Sbjct: 184 LQFVAHPSLFPVSEHNLEQYGDSWTRPGH-MVSSGPYKLEQW 224