Pairwise Alignments

Query, 566 a.a., predicted transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 552 a.a., DNA-binding transcriptional regulator SgrR from Escherichia coli ECRC100

 Score =  195 bits (495), Expect = 4e-54
 Identities = 161/578 (27%), Positives = 261/578 (45%), Gaps = 59/578 (10%)

Query: 9   QYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSGRGKRGQLR 68
           Q+ RLWQ   GK Q  T++ELA    CS RH+RTLL   Q+ GWL W+A+ GRGKR +L 
Sbjct: 9   QFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLT 68

Query: 69  FLVTPESLRNAMMEQALETGKQQDVLELAQLA--PGELRTLLQPFMGGQWQNDTPTLRIP 126
           FL T  +L+    E  LE   Q  + +L QL      +R +L   +G  ++     LR+ 
Sbjct: 69  FLYTGLALQQQRAEDLLE---QDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVL 125

Query: 127 YYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDNNTQRPIGDLAHHWETSTDGLRWDFYL 186
           YYRPL  L PG    R+E H+A QIFS LTR +        D+AHHW+     L W F+L
Sbjct: 126 YYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQ-QISPLHWRFFL 184

Query: 187 RSTLHWHNGDAVKASHLHQRLLMLLQLPALDQLFISVKRIEVTHPQCLTFFLHRPDYWLA 246
           R  +H+H+G  ++   +   L  +  LP    L+  +  I    P  L   L +PD WL 
Sbjct: 185 RPGVHFHHGRELEMDDVIASLKRINTLP----LYSHIADIVSPTPWTLDIHLTQPDRWLP 240

Query: 247 HRLA------------SYCSHLAHPQFPLIGTGPFRLTQFTAELVRLESHDYYHLRHPLL 294
             L             +  +  +HP    IGTGP+ + + +   +++++ D +     L+
Sbjct: 241 LLLGQVPAMILPREWETLSNFASHP----IGTGPYAVIRNSTNQLKIQAFDDFFGYRALI 296

Query: 295 KAVEYWITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQVSSGISLGFCYLTL--RKSPR 352
             V  W+ P + ++  G      + +   + EE +  S++  G     CY  L   ++ R
Sbjct: 297 DEVNVWVLPEIADEPAG-----GLMLKGPQGEEKEIESRLEEG-----CYYLLFDSRTHR 346

Query: 353 LSLWQARKVIS-IIHQSGLLQTLEVG-ENLITASHALLPGWTIPHWQVPDEVKLPKTLTL 410
            +  Q R  +S ++  + L+   E   + L   ++ LLP W        ++    ++LTL
Sbjct: 347 GANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTITSEKPAGLESLTL 406

Query: 411 VYHLPIELH-TMAERLQATLAAEGCELTIIFHNAKNWDDTTLQAHADLMMGDRLIGEAPE 469
            ++     H  +A  +Q  LA+    L I   +   W +  +++   L         +  
Sbjct: 407 TFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIESDIWL--------NSAN 458

Query: 470 YTLEQWLRCDPLWPHVFDAPAYAH---LQSTLDAVQIMPDEENRFNALKAVFSQLMTDAT 526
           +TL        L+ H+ + P   H   +   +DA +    E N  N  +    QL+    
Sbjct: 459 FTLPLDF---SLFAHLCEVPLLQHCIPIDWQVDAARWRNGEMNLANWCQ----QLVASKA 511

Query: 527 LTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAWLPAP 564
           + PL ++   I     + G+R+   GWF+F  AW   P
Sbjct: 512 MVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPP 549