Pairwise Alignments

Query, 623 a.a., peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) from Escherichia coli BW25113

Subject, 623 a.a., Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 1072 bits (2771), Expect = 0.0
 Identities = 550/623 (88%), Positives = 583/623 (93%)

Query: 1   MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAKVNDQEISRGQFENAFN 60
           MMDSLRTAANSLVLKIIF IIIVSFILTGVSGYLIGG NNYAAKVN QEISR QFENAFN
Sbjct: 1   MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYLIGGSNNYAAKVNGQEISRAQFENAFN 60

Query: 61  SERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQA 120
           +ERNRMQQQLGD+YSELAANEGYMK+LRQQVLNRLIDEALLDQY+RELKLGISDEQVKQA
Sbjct: 61  NERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQA 120

Query: 121 IFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGET 180
           IFATPAFQVDGKFDN+RYN I+NQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGET
Sbjct: 121 IFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGET 180

Query: 181 DELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLDA 240
           DELAALV+QQRVVREA IDVNALAAKQ VT+QE++SYY+QNK  FMTPEQFRVSYIKLDA
Sbjct: 181 DELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLDA 240

Query: 241 ATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAK 300
           ATMQ PVSDADIQ+YYDQH DQFTQP+R RYSIIQTKTED+AKAVLD LNKG DFA LAK
Sbjct: 241 ATMQAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTKTEDDAKAVLDALNKGEDFATLAK 300

Query: 301 EKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPAK 360
           EKS DIISARNGGDMGWLE++    ELKNAGLKEKGQ+SGVIKSSVGFL+ RLDDIQPAK
Sbjct: 301 EKSTDIISARNGGDMGWLEESATVPELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPAK 360

Query: 361 VKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAASNDTESLAGAEQAAGVKATQTGWFS 420
           VK L EVRDDIAAKVK EKALDAYYALQQKVSDAASND ESLAGAEQ AGVKA +TGWFS
Sbjct: 361 VKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAASNDNESLAGAEQVAGVKAVETGWFS 420

Query: 421 KDNLPEELNFKPVADAIFNGGLVGENGAPGINSDIITVDGDRAFVLRISEHKPEAVKPLA 480
           +D LPEELNFKPVADAIFNGGLVGENG PG NSDIITVDGDRAFV+R+SEHKPEAVKPLA
Sbjct: 421 RDTLPEELNFKPVADAIFNGGLVGENGTPGPNSDIITVDGDRAFVVRVSEHKPEAVKPLA 480

Query: 481 DVQEQVKALVQHNKAEQQAKVDAEKLLVDLKAGKGAEAMQAAGLKFGEPKTLSRSGRDPI 540
           +V+EQV ALV+HNKAEQQAK+DAEKLLV+LKAGKGAEAM+AAGL FGEPKTLSR+ +DP+
Sbjct: 481 EVKEQVTALVKHNKAEQQAKLDAEKLLVELKAGKGAEAMKAAGLSFGEPKTLSRTSQDPV 540

Query: 541 SQAAFALPLPAKDKPSYGMATDMQGNVVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIV 600
           SQAAFAL LP KDKP YG+A DMQGNVVLLA DEVK G+MPE QKKAMVQGITQNNAQIV
Sbjct: 541 SQAAFALSLPTKDKPVYGVANDMQGNVVLLAFDEVKAGAMPEAQKKAMVQGITQNNAQIV 600

Query: 601 FEALMSNLRKEAKIKIGDALEQQ 623
           FEALMSNLRKEAKIKIGDALEQQ
Sbjct: 601 FEALMSNLRKEAKIKIGDALEQQ 623