Pairwise Alignments

Query, 623 a.a., peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) from Escherichia coli BW25113

Subject, 626 a.a., Peptidyl-prolyl cis-trans isomerase D from Azospirillum sp. SherDot2

 Score =  166 bits (419), Expect = 4e-45
 Identities = 154/606 (25%), Positives = 271/606 (44%), Gaps = 46/606 (7%)

Query: 1   MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAKVNDQEISRGQFENAFN 60
           M+  +R  A S V+KI+F ++I+SF + G+            A+V   EI +   +  F 
Sbjct: 1   MLQFIRNFAGSWVVKILFVLLILSFGIWGIGDVFRSTTPTTVAEVGKVEIGQQALDQEFR 60

Query: 61  SERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQA 120
            +  R++  LG     L A +     L +Q L  LI   L D  A ++ + +  E V+  
Sbjct: 61  RQMERLRPMLG---GNLTAEQAKRFGLLEQSLQSLIQRTLFDLAAADMGIAVGPEVVRLR 117

Query: 121 IFATPAFQ-VDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGE 179
           I   PAF+   G+FD + +  +L    +T D Y   ++ +   Q +   V+      +  
Sbjct: 118 IADEPAFRNQQGQFDPNIFRSVLRNNQLTEDGYVAMIQRETARQLVAGAVSAGLTPPQPL 177

Query: 180 TDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKL- 238
             +L     ++RV    T+   ++       +  I   Y+ ++  F  PE   ++  +L 
Sbjct: 178 VQDLYRYRGEKRVAEVVTLPNASIGDVGVPDDATIKQAYDDHQVRFTAPEYRALTVARLS 237

Query: 239 -DAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAV-LDELNKGGDFA 296
            DA      + DA ++  Y++  ++F  P++   S+    T+DEAKA  + E  K    A
Sbjct: 238 PDALAKDIKIDDAQLRKAYEERANEFGAPEKR--SVQMVVTDDEAKAKQIAEAAKAKGLA 295

Query: 297 ALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDI 356
             AK+   + ++  N      +  A +P+    A   E G+ S  I+S++G+ ++ +  +
Sbjct: 296 EAAKDAGVEPVTLDN------IAKADLPEIGDAAFALEPGKPSDPIRSALGWHVMAVTGV 349

Query: 357 QPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSD--AASNDTESLAGAE-----QAA 409
            P+  KS ++VRD +AA++K E+ALD+ +++  +V D  A+    + +A A+     + A
Sbjct: 350 TPSSTKSFEDVRDQLAAEMKKEQALDSVFSIANRVEDQLASGASLDEVAQAQGLVLSKVA 409

Query: 410 GVKATQTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPGINSDIITVDGDRAFVLRIS 469
            + +T      KD  P+    K +    F           G +S++   +G     +R+ 
Sbjct: 410 AIDSTGKAPDGKDAAPDLPGLKALLPNAF-------QLKTGASSNLTEGEGSNFTAVRVD 462

Query: 470 EHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLVDLKAGKGAEAMQA---AGLKF 526
              P AV+PLADV+EQV A  Q  +  ++A   AE++   LK G  A A      AG  F
Sbjct: 463 SVIPAAVRPLADVREQVIADWQQEQRAERAAKKAEEIAARLKQGAEAAAQDVATQAGATF 522

Query: 527 GEPKTLSRSGRDPISQAAFALP--LPAK---DKPSYGMATDMQGNVVLLALDEVKQGSMP 581
                 +R      +QA   LP  L AK    KP+  +  +     V+  L E+    +P
Sbjct: 523 AMTSPFTRD-----AQAVQGLPAELVAKLFAAKPNEVVTGNTADAQVVTRLKEI----IP 573

Query: 582 EDQKKA 587
            D K A
Sbjct: 574 ADPKAA 579