Pairwise Alignments

Query, 491 a.a., muropeptide transporter (NCBI) from Escherichia coli BW25113

Subject, 454 a.a., Anhydromuropeptide permease from Azospirillum sp. SherDot2

 Score =  320 bits (820), Expect = 7e-92
 Identities = 178/426 (41%), Positives = 249/426 (58%), Gaps = 33/426 (7%)

Query: 4   QYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKF 63
           Q L +++ PR   +L LGF+ GLPLALT  TL  W+T + +    IG F+LV   Y  KF
Sbjct: 16  QALAVYRDPRVLAILFLGFSEGLPLALTGATLNVWLTEQGVSRTNIGLFALVTMPYALKF 75

Query: 64  LWSPLMDRYTPP----FFGRRRGWLLATQILLLVAIAAMGFLEPGTQLRWMAALAVVIAF 119
           LW+PL+DR   P     FGRRRGW L  Q  L+ A+  +G  +PG  L W A  AV++AF
Sbjct: 76  LWAPLIDRLRLPVMTRLFGRRRGWALTAQAALIAALLGLGGTDPGQDLWWTAMCAVLVAF 135

Query: 120 CSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLALWLADKWLGWQGMYWL 179
           CSASQDIV DA++ +VL   ++ AGAA+ VLGYR GM+ +G  AL++A+ + GW+  Y +
Sbjct: 136 CSASQDIVVDAYRVEVLEENQQAAGAAVLVLGYRFGMMAAGAGALYIAE-FHGWRTAYEV 194

Query: 180 MAALLIPCIIATLLAPEPTDTIPVPKTLEQ-------------------------AVVAP 214
           MA L++  +   LL  EP +  P P   E+                         AVVAP
Sbjct: 195 MAGLVLVGMATVLLCREPKE--PPPNAREKLIAEWLGHRPHLSGRSAVFLAWIYGAVVAP 252

Query: 215 LRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIV 274
              F  R    ++L  I  YKLG+  A  +++TF I  +GF   E+  V+K  GL ATI 
Sbjct: 253 FAQFMERRGWVVVLAFIASYKLGEVLAGQMSSTFYI-SLGFTKVEIANVSKLFGLWATIA 311

Query: 275 GALYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGT 334
           G L GG+L+ ++ + R L+I GILQ  SN GY +L+ +   +  +   V  EN+CGG+ T
Sbjct: 312 GGLLGGLLVGKVGVLRGLMIGGILQMVSNFGYVVLAWSGNDVSMLAVTVAVENVCGGIAT 371

Query: 335 SAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAAVP 394
           SAFVA L +LCN +++ATQ+ALLS+L  +G    G  +GW  E   W +F+L S+A A+P
Sbjct: 372 SAFVAYLSSLCNVAYTATQYALLSSLYKLGGDLFGASSGWLAERMDWVSFFLLSMAGAIP 431

Query: 395 GLILLL 400
            L LL+
Sbjct: 432 ALCLLI 437



 Score = 30.8 bits (68), Expect = 1e-04
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 364 GRVYVGPVAGWFVEAHGWSTFYLFSVAAAVPGLILLLVCRQTLE 407
           G +  G  A +  E HGW T Y       + G+  +L+CR+  E
Sbjct: 171 GMMAAGAGALYIAEFHGWRTAYEVMAGLVLVGMATVLLCREPKE 214