Pairwise Alignments

Query, 491 a.a., muropeptide transporter (NCBI) from Escherichia coli BW25113

Subject, 695 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  132 bits (332), Expect = 4e-35
 Identities = 76/198 (38%), Positives = 114/198 (57%), Gaps = 18/198 (9%)

Query: 17  LLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPF 76
           +L LGF++G+P+ L   +L  W+    ID   + FFS     Y FKF+W+PL+D    P+
Sbjct: 1   MLFLGFSAGIPILLIFSSLSLWLGEAGIDKSAVTFFSWAALGYSFKFVWAPLIDELPVPY 60

Query: 77  ----FGRRRGWLLATQILLLVAIAAMGFLEPG---TQLRWMAALAVVIAFCSASQDIVFD 129
                GRRR WLL  Q L++ AI  M F +P    + L  MAA AV++ F +A+QDIV D
Sbjct: 61  LTRTLGRRRAWLLIAQCLIITAICIMAFSDPALGQSHLIQMAAGAVLLGFSAATQDIVID 120

Query: 130 AWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLALWLADKWLG----------WQGMYWL 179
           A++ ++   E +   A+    GYR+GM+V+G  AL+LA  +LG          WQ  Y +
Sbjct: 121 AYRIELAETEMQTVLASTYNAGYRIGMIVAGAGALFLA-AYLGTAKGNYIYTAWQTTYLV 179

Query: 180 MAALLIPCIIATLLAPEP 197
           MAA+++  ++ TL+  EP
Sbjct: 180 MAAVMLVGVLTTLIIREP 197



 Score = 53.1 bits (126), Expect = 3e-11
 Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 16/164 (9%)

Query: 143 AGAAISVLGYRLGMLVSGGLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIP 202
           +G A+  L Y +G+  S  L L+ A ++LG   +  L+ A L+                 
Sbjct: 232 SGTAVEALVYNMGIEDSFLLFLFEALRFLGSGAVSILVGATLVKLGAVNR---------- 281

Query: 203 VPKTLEQAVVAPLRDFFGRNN---AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGE 259
             +   +  V P+ DFF R     A ++LLLI  Y++ D  A  ++  F  + + F   +
Sbjct: 282 --QMAFETWVNPILDFFKRYGLKLALVLLLLIGFYRISDIIAGVISNVFY-QDLNFSKEQ 338

Query: 260 VGVVNKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQGASN 303
           +    K  G++ +++G   GG+L QR+++ + + +  +L  ++N
Sbjct: 339 IAEAVKVYGVIFSLIGGFLGGLLAQRINIMKLMFVGAVLASSTN 382



 Score = 52.4 bits (124), Expect = 5e-11
 Identities = 25/79 (31%), Positives = 46/79 (58%)

Query: 322 AVFFENLCGGMGTSAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGW 381
           A+  +NL  G+  +AF+A L +L + SF+A Q+A+ S+L  +    +G  +G  V   G+
Sbjct: 598 AIIVDNLASGLAGAAFIAFLSSLTSVSFTAVQYAIFSSLMTLTPKILGGYSGTIVSNIGY 657

Query: 382 STFYLFSVAAAVPGLILLL 400
             F+L +    +P L+L++
Sbjct: 658 PKFFLMTTLIGIPILVLVV 676