Pairwise Alignments

Query, 454 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

Subject, 417 a.a., Bicyclomycin resistance protein from Pseudomonas sp. RS175

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 72/271 (26%), Positives = 133/271 (49%), Gaps = 14/271 (5%)

Query: 17  LGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLTQAVFQIPFGLLSDRIG 76
           L  + ++ +L   ++LP     G  L G     +G+ +  + +T A+ Q+  G L+DR G
Sbjct: 40  LAGLAAISILSTNIILPAFADIGQEL-GVPTRALGLTLSSFFITFALAQLIVGPLADRYG 98

Query: 77  RKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGSGAIAAAVM--ALLSDLTREQNRT 134
           RK L++GGL++F AG+ +A  + ++  ++LGR +Q  G  AAAV+  A+  DL   +N  
Sbjct: 99  RKKLVLGGLSLFVAGTAVAGFATTLETLLLGRIIQALGVCAAAVLSRAIARDLFEGENLA 158

Query: 135 KAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPN-SSTHV 193
           +A++   ++       + ++G ++T  LG  A+F ++A+ A   IA+ I+       TH 
Sbjct: 159 RALSLTMIATAAAPGFSPLIGSLLTSTLGWRAIFALVALAA---IAIAIFYARGLGETHP 215

Query: 194 LNRESG----MVKGSFSKVLAEPRLLKLNFGIMCLHILLMSTFVALPGQL-ADAGFPAAE 248
             R +      V  ++  +L + R +     +  L   L ++F A P  L +  G  + E
Sbjct: 216 PERRAPHSPLSVLRAYGGLLRDRRFVLPAVSVSLLMSGLFASFGAAPAILMSGIGLTSLE 275

Query: 249 HWKVYLATMLIAF--GSVVPFIIYAEVKRKM 277
               + AT+ + F  G   P +      RK+
Sbjct: 276 AGLYFAATVFVVFAAGMAAPHLARRYGSRKI 306