Pairwise Alignments

Query, 454 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

Subject, 405 a.a., Arabinose efflux permease from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 79.7 bits (195), Expect = 2e-19
 Identities = 101/399 (25%), Positives = 174/399 (43%), Gaps = 46/399 (11%)

Query: 25  MLGMFMVLPVLTTYG--MALQGASEA-----LIGIAIGIYGLTQAVFQIPFGLLSDRIGR 77
           MLG  ++LP L  Y   +AL+   +       IG+   IY L Q +F + +G LSDR GR
Sbjct: 21  MLGYGILLPTLPYYTERLALKDNLDTDLINFHIGLLTSIYPLFQLIFVVVWGKLSDRYGR 80

Query: 78  KPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQG--SGAIAAAVMALLSDLTREQNRTK 135
           KP+I+ GL  F    ++  L+ S+  + + R   G  + ++     A LSD+T E+ RTK
Sbjct: 81  KPVIIIGLIGFVIMQLLTGLATSLTMLYIARIFGGVFTSSVIPVSNAYLSDITSEKRRTK 140

Query: 136 AMAFIGVSFGITFAIAMVLGPIIT-------------HKLGLHALFWMIAILATTGIALT 182
            MA+ GV+         V+G  ++             H       F   A+L    + + 
Sbjct: 141 IMAWSGVAISSGVIFGPVIGGFLSQSDLHFEYAIGQLHLGRFSTPFLFAALLGFIVLVIV 200

Query: 183 IWVVPNS-STHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHILLMSTFVALPGQLAD 241
           +  + NS   H    +    + SFS+      LL L+F I  + + L  T  ++ G+  +
Sbjct: 201 VKCLKNSVRIHKFTTQKFTFRFSFSQYFLV--LLALSFVIQFV-VTLFETVFSIYGK-DE 256

Query: 242 AGFPAAEHWKVYLATMLIAFGSVVP-----FIIYAEVKRKMKQVFVFCVGLIVVAEIVLW 296
            GF + +     +    I  GS++      F  Y E     K+   F + +  ++ I   
Sbjct: 257 LGFNSNQ-----VGIGFILCGSIMAVLQPVFASYGEKILSTKKQIGFGLFISGISLIAFP 311

Query: 297 NAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTA--MGVYSTSQFLGVAIG 354
             + +F  +V G+ + F A   M  + P+L+S  S      T   + + S++  +G  +G
Sbjct: 312 FFKNEF--VVYGLIVVFAAGGAM--VTPNLLSAVSLLSKTNTGRNISIQSSTNSVGQILG 367

Query: 355 GSLGGW-INGMFDGQGVFLAGAMLAAVWLTVASTMKEPP 392
             LG W + G F    +     +L A+   +   +K+PP
Sbjct: 368 PVLGTWLVTGGFYYPFLIAGSIILVAIGFLI--FLKKPP 404