Pairwise Alignments

Query, 362 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 528 a.a., cyclic di-GMP phosphodiesterase from Serratia liquefaciens MT49

 Score =  186 bits (471), Expect = 2e-51
 Identities = 100/247 (40%), Positives = 145/247 (58%), Gaps = 2/247 (0%)

Query: 109 TPE-AISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSG 167
           +PE A+   ++ +EF    QPVF  Q+G + G E L+RW+HP  G IPPD FIP AES G
Sbjct: 268 SPERALMRGIKRNEFFIEYQPVFHTQSGTIGGLEALIRWQHPIEGRIPPDLFIPYAESEG 327

Query: 168 LIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKI 227
           LIV +TR L +  A+    +   LP    +G+N+S     A  F  +   L+ +L  D  
Sbjct: 328 LIVPLTRHLFRLIAEDAPKLATALPQGAKLGLNISPSHLSAPSFHHDVYELLAQLPGDYF 387

Query: 228 KLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKS 287
            LV E+TER  +     A A FD LHQ  I  A+DDFGTG++   YL+ F +D++KID+ 
Sbjct: 388 TLVFEITERGMVE-EGNALAEFDWLHQQGIEIAIDDFGTGHSALIYLERFSMDYLKIDRG 446

Query: 288 FVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPV 347
           FV     D ++  ++D ++ LA+K  +  VAEGVET EQ   +  + V+F+QGY YS P+
Sbjct: 447 FVNSIGQDTVTAPVLDAVISLAKKLKMQTVAEGVETAEQVSFLQEQDVNFMQGYYYSRPL 506

Query: 348 PGNKFIS 354
             + F++
Sbjct: 507 SIDNFVA 513