Pairwise Alignments

Query, 362 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 518 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score =  165 bits (417), Expect = 3e-45
 Identities = 91/247 (36%), Positives = 142/247 (57%), Gaps = 2/247 (0%)

Query: 113 ISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIM 172
           I  A++  +F    QPV   Q   +TG EVL+RW HP  G IPPD FI  AES  +IV +
Sbjct: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327

Query: 173 TRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLE 232
           T+ L +  A     ++ +LP     GIN++     +  F+ +   L+  L     ++VLE
Sbjct: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387

Query: 233 LTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMA 292
           +TER+ +    EA  +F  LH   +  A+DDFGTG++   YL+ F +D++KID+ F+   
Sbjct: 388 ITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446

Query: 293 SVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKF 352
             + I+  ++D ++ LA++  +  VAEGVET EQA  +  +GV+F+QGY  S P+P + F
Sbjct: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506

Query: 353 ISEWVMK 359
           +  W+ K
Sbjct: 507 V-RWLKK 512