Pairwise Alignments

Query, 362 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 507 a.a., putative membrane-anchored cyclic-di-GMP phosphodiesterase from Escherichia coli BL21

 Score =  201 bits (511), Expect = 4e-56
 Identities = 110/251 (43%), Positives = 146/251 (58%), Gaps = 1/251 (0%)

Query: 98  YINDNHYHHIVTPEAI-SLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPP 156
           ++ D +++   TPE I   A+ N E  P+ QPV   + G L G EVL RW+ P  G I P
Sbjct: 237 FLLDRYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISP 296

Query: 157 DQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECL 216
             FIPLAE SGLIV +T+ LM Q A  +  +   LP+ FHIGIN SA   ++  F  EC 
Sbjct: 297 AAFIPLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEGFHIGINFSASHIISPTFVDECF 356

Query: 217 NLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQA 276
           N  +      + LVLE+TER P+ V        + LH++    ALDDFGTGY+   YL  
Sbjct: 357 NFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIALDDFGTGYSGLSYLHD 416

Query: 277 FPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVH 336
             +D+IKID SFV   + D  S  I+D +++LARK  +SIVAEGVET+EQ D +    + 
Sbjct: 417 LHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNNIT 476

Query: 337 FLQGYLYSPPV 347
           F QGY +  PV
Sbjct: 477 FQQGYYFYKPV 487