Pairwise Alignments

Query, 284 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 285 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 86.7 bits (213), Expect = 5e-22
 Identities = 67/236 (28%), Positives = 112/236 (47%), Gaps = 5/236 (2%)

Query: 40  RWHALTQGAAKLEMPTGEIFTLRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSAR 99
           R + L +G A LEMP G +    P ++VL+P+   HRL     E   +V  +LR      
Sbjct: 37  RVYLLKEGQASLEMPDGTLRIPEP-SLVLVPRPLPHRLVAAKAERAQVVAASLRFDGGID 95

Query: 100 YFLTSLPETLFLAPVNHSVEYNWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVRE 159
             L+       + P+    +   +   + +L  E+ +     +A+ +++        +R 
Sbjct: 96  NPLSVALTDTIVMPLQ---QIPMIAGTLDWLFDEAFAEHCSREAVMNRLFELMVIQFLRH 152

Query: 160 WIAQVNTEKNILSLLLHPRLGAVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVSG 219
            +A  +    ++S L   RL   +  +   P   WTV+ +A  ++MSRASFA  F  V G
Sbjct: 153 MMAYHSMTTGMMSGLADLRLARAMTLLHNNPERPWTVQEMAVESNMSRASFAAHFHKVVG 212

Query: 220 TTPLAVLTKLRLQIAAQMFSRETLPVVVIAESVGYASESSFHKAFVREFGCTPGEY 275
            TP   +   R+ + AQ   RE  P+ +IA+ VGY S S+  +AF R+ G +P E+
Sbjct: 213 QTPADYVLSWRVSL-AQKRLREGRPIALIADEVGYESPSALARAFRRKIGTSPREW 267