Pairwise Alignments

Query, 284 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 320 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  100 bits (248), Expect = 5e-26
 Identities = 70/272 (25%), Positives = 116/272 (42%), Gaps = 30/272 (11%)

Query: 41  WHALTQGAAKLEMPTGEIFTLRPGNVVLLPQNSAHRLSHVDNE----------------- 83
           +H L  G A L    G +F L  GN V +    AH LS   +                  
Sbjct: 50  FHFLAAGTATLRTDDGSLFELSAGNAVFISHGGAHALSSTADRPVQDINGFDATSLGDTV 109

Query: 84  -----------STCIVCGTLRLQHSARYFLTSLPETLFLAPVNHSVEYNWLREAIPFLQQ 132
                      ST +    +  +  +   L SL   L L        Y  L   +  +++
Sbjct: 110 CAVDASPDTPPSTLLFSACMAFELGSIQGLGSLMPALMLIDAQGQ-RYPGLMPILAVMER 168

Query: 133 ESRSAMPGVDALCSQICATFFTLAVREWI-AQVNTEKNILSLLLHPRLGAVIQQMLEMPG 191
           E  +A  G   + +++      + VR W+         +++ L   RL   +  + + PG
Sbjct: 169 EVSAARIGYSGILARLADVVAAMIVRGWVECACGNASGLVAALRDTRLAGALLALHQQPG 228

Query: 192 HAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSRETLPVVVIAES 251
             W+V  LA+  H SR+ FA+ F+   G  PL  +T+LR+++A+Q  + E LP+  +A  
Sbjct: 229 RDWSVAELAAHCHTSRSVFAERFQATLGIPPLRYVTELRMRLASQWLTLERLPIEEVALR 288

Query: 252 VGYASESSFHKAFVREFGCTPGEYRERVRQLA 283
           +GY S+++F +AF R  G  PG  R+ +R  A
Sbjct: 289 LGYTSQAAFSRAFKRITGQPPGASRQNLRSPA 320