Pairwise Alignments

Query, 284 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 306 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 77.4 bits (189), Expect = 4e-19
 Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 37/272 (13%)

Query: 41  WHALTQGAAKLEMPT-------------GEIFTLRPGNVVLLPQNSAHRLSH-VDNESTC 86
           WHA TQG  +                   +   L  G+ V L ++ A+RLS   D    C
Sbjct: 31  WHASTQGMGRASFHLVVQGHCWLHIDGQPQAICLEKGDAVFLLRDLAYRLSSDQDPVDAC 90

Query: 87  -------------------IVCGTLRLQHS-ARYFLTSLPETLFLAPVNHSVEYNWLREA 126
                              +VCG    Q       +  L + + L   + S      R  
Sbjct: 91  AQPRQAMQALDSQAADGVGLVCGFFHFQSGLCSLIVEGLADWILLRAEDPSGSA--ARAL 148

Query: 127 IPFLQQESRSAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHPRLGAVIQQM 186
              + +E R        L  ++    F   +R+ +    +   +++L   P    +++Q+
Sbjct: 149 FGLILEECRRDAGPSQMLLERLTHLLFLYVLRQQVHAGQSLGGLVALARQPAFAGLLEQL 208

Query: 187 LEMPGHAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSRETLPVV 246
           +E PG  WT+E++A+   +SR++F + F +++G +P  VL  LR++ A+Q+  +    V 
Sbjct: 209 IEHPGQTWTMENMAACTGLSRSAFFKRFSELAGQSPGQVLLALRMRHASQLL-QAGHTVE 267

Query: 247 VIAESVGYASESSFHKAFVREFGCTPGEYRER 278
            +   VGY S ++F +AF +  G  PG YR +
Sbjct: 268 QVGAQVGYQSVAAFTRAFAKAVGVQPGAYRRQ 299