Pairwise Alignments

Query, 284 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 326 a.a., Transcriptional regulator, AraC family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  107 bits (266), Expect = 5e-28
 Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 29/269 (10%)

Query: 38  VIRWHALTQGAAKLEMPTGEIFTLRPGNVVLLPQNSAHRLSHVDN--------------- 82
           V+ +H +T+G   +E+       L  G+V++  Q  AHR+                    
Sbjct: 48  VVIFHLVTEGECFVELEHQPPVRLGAGDVIVFSQGDAHRMGSAPGLTPAPGTPLKELLQR 107

Query: 83  -----------ESTCIVCGTLRLQ-HSARYFLTSLPETLFLAPVNHSVEYNWLREAIPFL 130
                       ST ++CG L      AR  L  LP  L    V  S    WL  ++ + 
Sbjct: 108 RPRQLMYGGGGASTRLLCGYLACDARLARLLLAGLPP-LVRVNVRGSNAGTWLEASVRYA 166

Query: 131 QQESRSAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHPRL-GAVIQQMLEM 189
             E+RS  PG   + S++    F   +R +I + +  +      L  R+ GA +  + + 
Sbjct: 167 LAEARSPRPGGAGVLSKLAEVLFIEVLRLYINEQSAGRTGWLAGLGDRVVGAALNALHQR 226

Query: 190 PGHAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSRETLPVVVIA 249
           P HAWT+E LA  A  SR+  A+ F+ + G++P+  L + R+ +AA +  R   P+  IA
Sbjct: 227 PAHAWTLEELAREAGTSRSVLAERFQHLVGSSPMQYLIQWRMMLAANLLCRSKAPLSRIA 286

Query: 250 ESVGYASESSFHKAFVREFGCTPGEYRER 278
           E VGY ++++F +AF RE+G  P  +R R
Sbjct: 287 EDVGYQTDTAFIRAFRREYGVPPATWRRR 315