Pairwise Alignments

Query, 284 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 284 a.a., Putative HTH-type transcriptional regulator ykgD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  399 bits (1026), Expect = e-116
 Identities = 202/282 (71%), Positives = 222/282 (78%)

Query: 1   MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMPTGEIFT 60
           MDALSRLL LNAPQG+IDKNC LG DWQLPH AGELSVIRWH +TQG A+LEMPTG+  T
Sbjct: 1   MDALSRLLTLNAPQGSIDKNCPLGGDWQLPHAAGELSVIRWHTVTQGEAQLEMPTGDAMT 60

Query: 61  LRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYFLTSLPETLFLAPVNHSVEY 120
           L PG VV+LPQNSAHRL       T IVCG+LRL  ++RYFLT+LPE L LAP  HS   
Sbjct: 61  LTPGKVVILPQNSAHRLRQSGESPTHIVCGSLRLHTTSRYFLTALPEVLCLAPPPHSPAS 120

Query: 121 NWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHPRLG 180
            W+   I  LQQES   +PG D L SQ CAT FTLAVR+W++Q  T K++L+LLLHPRLG
Sbjct: 121 IWINATILLLQQESERHLPGADVLYSQQCATLFTLAVRDWLSQAGTAKSVLNLLLHPRLG 180

Query: 181 AVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSR 240
            VI  MLE P H WTVE+LA   HMSRASFAQLFRDVS TTPLAVLT LRLQIAAQ  SR
Sbjct: 181 RVILHMLETPAHPWTVETLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSR 240

Query: 241 ETLPVVVIAESVGYASESSFHKAFVREFGCTPGEYRERVRQL 282
           E LPV+VIAESVGYASESSFHKAFVREFGCTPGEYR+RV  L
Sbjct: 241 EVLPVMVIAESVGYASESSFHKAFVREFGCTPGEYRKRVSAL 282