Pairwise Alignments

Query, 384 a.a., CP4-6 prophage; predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 379 a.a., IS481 family transposase from Paraburkholderia sabiae LMG 24235

 Score =  330 bits (846), Expect = 4e-95
 Identities = 181/376 (48%), Positives = 230/376 (61%), Gaps = 7/376 (1%)

Query: 5   MPWDARDTMSLRTEFVLFASQDGANIRSLCRRFGISPATGYKWLQRWAQEGAAGLQDRPR 64
           MPW+A++TM+LR EFV  A+    +   LCRR+ IS  TGYKWL R   EG  GL DR R
Sbjct: 1   MPWEAKNTMNLREEFVSLAATQALSFSELCRRYRISRQTGYKWLDRHKAEGPGGLADRSR 60

Query: 65  IPHHSPNRSSDDITALLRMAHDRHERWGARKIKRWLEDQGHT-MPAFSTVHNLMARHGLL 123
            PHHSP RS + I A +      H  WG RKI+R L D G T +PA +T+  ++ RHGL+
Sbjct: 61  RPHHSPLRSPEHIEARVLELRREHG-WGGRKIERRLRDLGETEVPAPATITEILRRHGLI 119

Query: 124 PG-ASPGIPATGRFEHDAPNRLWQMDFKGHFP-FGGGRCHPLTLLDDHSRFSLCLAHCTD 181
              AS       RFEH  PN LWQMDFKG       GRC PLT++DDHSR+++ L+ C+ 
Sbjct: 120 DEQASQQRQHWQRFEHAHPNLLWQMDFKGDVQTLKDGRCMPLTVIDDHSRYNIVLSACSR 179

Query: 182 ERRETVQQQLVSVFERYGLPDRMTMDNGSPWGD--TTGTWTALELWLMRLGIRVGHSRPY 239
              + VQ  L   F  YGLP R+  DNG+PWG     G  T L +WL+RLGI V +SRPY
Sbjct: 180 TTTQVVQAALERAFRCYGLPARINTDNGAPWGSPGAPGQLTELAVWLIRLGIEVSYSRPY 239

Query: 240 HPQTQGKLERFHRSLKAEVLQGKWFADSGELQRAFDHWRTVYNLERPHEALDMAVPGSRY 299
           HPQT GK ERFHR+LKAEVLQ + F+   ++QRA D WR VYN+ERPHEAL MA P +RY
Sbjct: 240 HPQTNGKDERFHRTLKAEVLQRQAFSTHEDMQRALDRWRHVYNVERPHEALGMATPITRY 299

Query: 300 QPSARQYSGNTTPPEYDEGVMVRKVDISGKLSVKGVSLSAGKAFRGERVGLKEMQ-EDGS 358
             S R        PEY  G  V +V+ SG + ++G  L    A +G +V  +  + EDG 
Sbjct: 300 ACSLRAMPERVPEPEYGCGDEVLRVNASGVVRLRGQKLKLSIALKGLQVAARPCEKEDGV 359

Query: 359 YEVWWYSTKVGVIDLK 374
            E+W+   +V  +DLK
Sbjct: 360 IEIWFAHQRVAKLDLK 375