Pairwise Alignments

Query, 384 a.a., CP4-6 prophage; predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 379 a.a., IS481 family transposase from Paraburkholderia sabiae LMG 24235

 Score =  329 bits (844), Expect = 7e-95
 Identities = 180/376 (47%), Positives = 231/376 (61%), Gaps = 7/376 (1%)

Query: 5   MPWDARDTMSLRTEFVLFASQDGANIRSLCRRFGISPATGYKWLQRWAQEGAAGLQDRPR 64
           MPW+A++TM+LR EFV  A+    +   LCRR+ IS  TGYKWL R   EG  GL DR R
Sbjct: 1   MPWEAKNTMNLREEFVSLAATQALSFSELCRRYRISRQTGYKWLDRHKAEGPGGLADRSR 60

Query: 65  IPHHSPNRSSDDITALLRMAHDRHERWGARKIKRWLEDQGHT-MPAFSTVHNLMARHGLL 123
            PHHSP RS + I A +      H  WG RKI+R L+D G T +PA +T+  ++ RHGL+
Sbjct: 61  RPHHSPLRSPEHIEARVLELRREHG-WGGRKIERRLKDLGETEVPAPATITEILRRHGLI 119

Query: 124 PG-ASPGIPATGRFEHDAPNRLWQMDFKGHFP-FGGGRCHPLTLLDDHSRFSLCLAHCTD 181
              AS       RFEH  PN LWQMDFKG       GRC PLT++DDHSR++L L+ C+ 
Sbjct: 120 DEQASQQRQHWQRFEHAHPNLLWQMDFKGDVQTLKDGRCMPLTVIDDHSRYNLVLSACSR 179

Query: 182 ERRETVQQQLVSVFERYGLPDRMTMDNGSPWGDTT--GTWTALELWLMRLGIRVGHSRPY 239
              + VQ +L   F  YGLP R+  DNG+PWG  +  G  T L +WL+RLGI V +SRPY
Sbjct: 180 TTTQVVQAELERAFRCYGLPARINTDNGAPWGSPSAPGQLTELAVWLIRLGILVSYSRPY 239

Query: 240 HPQTQGKLERFHRSLKAEVLQGKWFADSGELQRAFDHWRTVYNLERPHEALDMAVPGSRY 299
           HPQT GK ERFHR+LKAEVL  + F+    +Q+A D WR VYN+ERPHEAL MA P +RY
Sbjct: 240 HPQTNGKDERFHRTLKAEVLDRQAFSTHAHMQQALDRWRHVYNVERPHEALGMATPITRY 299

Query: 300 QPSARQYSGNTTPPEYDEGVMVRKVDISGKLSVKGVSLSAGKAFRGERVGLK-EMQEDGS 358
             S R        PEY  G  V +V+ SG + ++G  L    A +G +V  +   +EDG 
Sbjct: 300 ACSLRAMPERVPEPEYGPGDEVLRVNASGVVRLRGQKLKLSIALKGLQVAARMSEKEDGV 359

Query: 359 YEVWWYSTKVGVIDLK 374
            E+W+   +V  +DLK
Sbjct: 360 IEIWFAHQRVAKLDLK 375