Pairwise Alignments

Query, 246 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 244 a.a., peptidoglycan meso-diaminopimelic acid protein amidase from Pectobacterium carotovorum WPP14

 Score =  293 bits (751), Expect = 2e-84
 Identities = 142/248 (57%), Positives = 181/248 (72%), Gaps = 6/248 (2%)

Query: 1   MRKIALILAML--LIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLY 58
           M+KIAL  AML  L   V  +    ++    P++KE KQQL+GSP+YIQIFKEER  +LY
Sbjct: 1   MQKIALSFAMLFFLPSLVVTSAASETAPPLAPIAKELKQQLLGSPIYIQIFKEERIFELY 60

Query: 59  VKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFP 118
            K+G +Y+LL+ Y ICKYSGGLGPK+ +GD KSPEGFY V   QLKPDS+YY+AINIGFP
Sbjct: 61  AKVGNEYRLLEQYPICKYSGGLGPKRVEGDLKSPEGFYQVDLRQLKPDSQYYRAINIGFP 120

Query: 119 NAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFGQPSVQVSIYPFRM 178
           N YD++ GY G+YLMIHG+CVS+GCYAMTN  +DEI+++   AL  GQ  + ++IYPFRM
Sbjct: 121 NDYDKSQGYSGRYLMIHGECVSVGCYAMTNTYMDEIYRYAEAALRNGQAKIDIAIYPFRM 180

Query: 179 TDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLSHEVVQPQLAS 238
           T+ NM+RH+ S +  FW+QL+PGY YF Q  +PP V+V NG+YVV+ PL     QP L  
Sbjct: 181 TEQNMQRHRNSTYASFWKQLQPGYAYFNQHNQPPAVTVFNGQYVVNPPLM--TSQPTL-- 236

Query: 239 NYTLPEAK 246
            Y L E K
Sbjct: 237 KYALAETK 244