Pairwise Alignments

Query, 246 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 241 a.a., murein L,D-transpeptidase from Dickeya dadantii 3937

 Score =  302 bits (773), Expect = 5e-87
 Identities = 149/247 (60%), Positives = 184/247 (74%), Gaps = 7/247 (2%)

Query: 1   MRKIALILAMLLI-PCVSFAGLLGSSSSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
           M K+AL LAML + P V+ +     ++  +P + E  QQ+ GSPVYIQIFKEER L+LY 
Sbjct: 1   MHKVALSLAMLFVLPSVAISN--SYANQVSPPATETTQQVAGSPVYIQIFKEERILELYA 58

Query: 60  KMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPN 119
           + G +Y+L+ SY ICKYSGGLGPK  +GDFKSPEGFY V   QLKPDS YY+AIN+GFPN
Sbjct: 59  RTGNEYKLVQSYPICKYSGGLGPKMTEGDFKSPEGFYQVDLKQLKPDSHYYRAINVGFPN 118

Query: 120 AYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFGQPSVQVSIYPFRMT 179
            YDRAHGY G+YLMIHG+CVSIGCYAMTNQ I EI+ +V  AL  GQ  V+++IYPFRM 
Sbjct: 119 EYDRAHGYSGRYLMIHGECVSIGCYAMTNQYIAEIYTYVEKALRNGQQKVELAIYPFRMN 178

Query: 180 DANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLSHEVVQPQLASN 239
           + NMKRH  S +  FW QL+PGY YF +T +PP VSV+NG+YVV++P    V QP+  SN
Sbjct: 179 EQNMKRHSRSTYYKFWSQLQPGYAYFNRTHQPPAVSVLNGQYVVNQPA--PVGQPE--SN 234

Query: 240 YTLPEAK 246
           YTL + K
Sbjct: 235 YTLAKTK 241