Pairwise Alignments

Query, 385 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 385 a.a., CdaR family transcriptional regulator from Dickeya dianthicola 67-19

 Score =  648 bits (1672), Expect = 0.0
 Identities = 324/385 (84%), Positives = 359/385 (93%)

Query: 1   MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60
           MA +HL+ K+AQ+IVARTM+IID+NINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV
Sbjct: 1   MASYHLNNKLAQEIVARTMKIIDSNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60

Query: 61  VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120
           VDIDDAVARHLHGVR GINLPL+++GEIVGVIGLTG P  LR+YGELVCMTAEMMLEQ+R
Sbjct: 61  VDIDDAVARHLHGVRPGINLPLKIDGEIVGVIGLTGNPGQLRQYGELVCMTAEMMLEQAR 120

Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180
           L+H+LAQDSRLREELV+NLI+ +E +PAL EWAQRLGIDLNQPRV A+VEVDSGQLGVDS
Sbjct: 121 LLHMLAQDSRLREELVLNLIRTDELSPALMEWAQRLGIDLNQPRVAAVVEVDSGQLGVDS 180

Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240
           AMAELQQLQ  LTTPERNNL+AIVSLTEMVVLKPALN+ GRWDAE+HR+RV+ L++RM+E
Sbjct: 181 AMAELQQLQTLLTTPERNNLIAIVSLTEMVVLKPALNNHGRWDAEEHRRRVDTLLSRMEE 240

Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300
             +LR RV+LGNYFTGPGSIARSYRTA+TTM VGKQRMP  R YFYQDLMLPVLLDSLRG
Sbjct: 241 SSRLRVRVALGNYFTGPGSIARSYRTARTTMSVGKQRMPLQRSYFYQDLMLPVLLDSLRG 300

Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360
            WQANEL RPLARLK MD+NGLLRRTL AWFR+NVQP AT+K+LF+HRNTLEYRLNRISE
Sbjct: 301 GWQANELVRPLARLKAMDSNGLLRRTLNAWFRNNVQPGATAKSLFVHRNTLEYRLNRISE 360

Query: 361 LTGLDLGNFDDRLLLYVALQLDEER 385
           LTGLDLGNFDDRLLLYVALQLDEE+
Sbjct: 361 LTGLDLGNFDDRLLLYVALQLDEEQ 385