Pairwise Alignments

Query, 385 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 385 a.a., CdaR family transcriptional regulator from Dickeya dadantii 3937

 Score =  649 bits (1673), Expect = 0.0
 Identities = 323/385 (83%), Positives = 359/385 (93%)

Query: 1   MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60
           MA +HL+ K+AQ+IVARTM+IID+NINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV
Sbjct: 1   MASYHLNNKLAQEIVARTMKIIDSNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV 60

Query: 61  VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR 120
           VDIDDAVARHLHGVR GINLPL+++GEI+GVIGLTG P  LR+YGELVCMTAEMMLEQ+R
Sbjct: 61  VDIDDAVARHLHGVRPGINLPLKIDGEIIGVIGLTGNPGQLRQYGELVCMTAEMMLEQAR 120

Query: 121 LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS 180
           L+H+LAQDSRLREELV+NLI+ ++ +PAL EWAQRLGIDLNQPRV A+VEVDSGQLGVDS
Sbjct: 121 LLHMLAQDSRLREELVLNLIRTDDLSPALMEWAQRLGIDLNQPRVAAVVEVDSGQLGVDS 180

Query: 181 AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE 240
           AMAELQQLQ  LTTPERNNL+AIVSLTEMVVLKPALN+ GRWDAE+HR+RV+ L++RM+E
Sbjct: 181 AMAELQQLQTLLTTPERNNLIAIVSLTEMVVLKPALNNHGRWDAEEHRRRVDTLLSRMEE 240

Query: 241 YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG 300
             +LR RV+LGNYFTGPGSIARSYRTA+TTM VGKQRMP  R YFYQDLMLPVLLDSLRG
Sbjct: 241 SSRLRVRVALGNYFTGPGSIARSYRTARTTMSVGKQRMPAQRSYFYQDLMLPVLLDSLRG 300

Query: 301 DWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE 360
            WQANEL RPLARLK MD+NGLLRRTL AWFR+NVQP AT+KALF+HRNTLEYRLNRISE
Sbjct: 301 GWQANELVRPLARLKAMDSNGLLRRTLNAWFRNNVQPGATAKALFVHRNTLEYRLNRISE 360

Query: 361 LTGLDLGNFDDRLLLYVALQLDEER 385
           LTGLDLGNFDDRLLLYVALQLDEE+
Sbjct: 361 LTGLDLGNFDDRLLLYVALQLDEEQ 385