Pairwise Alignments

Query, 617 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 505 a.a., DUF3300 domain-containing protein from Serratia liquefaciens MT49

 Score =  150 bits (378), Expect = 2e-40
 Identities = 152/540 (28%), Positives = 223/540 (41%), Gaps = 82/540 (15%)

Query: 60  SAPPV-TPAVVKS--AFSTAQIDQWVAPVALYPDALLSQVLMASTYPTNVAQAVQWSHDN 116
           +AP V TPA   +    S  Q+ Q V+PVAL+PD LL+QVL  + YP  ++ A  W   N
Sbjct: 33  TAPAVATPAAASTYTPLSADQLYQLVSPVALFPDKLLAQVLAGAGYPDQISAADNWLAQN 92

Query: 117 PLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDSVQ 176
              Q  A   A   QPWD SV+ LV FP ++  M +N  W   LG A+L  P DVM+++Q
Sbjct: 93  RGLQPAALTAAAGAQPWDPSVRGLVQFPDVLDQMAKNIPWTTALGSAYLNDPTDVMNAIQ 152

Query: 177 RLRQLAQQTGSLKSSTEQKVITTTKKAVPVKQTVTAPVIPSNTVLTANPVITEPATTVIS 236
            +RQ A   G+LK+S +Q+V+ T     P  + V     P +       V+  PA T++ 
Sbjct: 153 VMRQRAAAKGTLKTSPQQRVVIT-----PATRYVEPQPYPQS-------VVVAPAQTIV- 199

Query: 237 IEPANPDVVYIPNYNPTVVYGNWANTAYPPVYLPPPAGEPFVDSFVRG-FGYSMGVATTY 295
           IEP+ PDVVY+P Y+P V YG     AYP  +    +G    D    G   + +GVA   
Sbjct: 200 IEPSQPDVVYVPRYDPWVAYGE-PVPAYPSYHYQSASGYSSGDMLAAGVISFGVGVAVGA 258

Query: 296 ALFSSIDWDDDDHDHHHHDNDDYHHHDGGHRDGNG--WQHNGDNINIDVNNFNRITGEHL 353
            +            + HHDN  +H  D    D       +N   I+      NR+T    
Sbjct: 259 LI------------NQHHDN--WHSWDVRWNDRRQPVVYNNAPYISHSTTVINRVT---- 300

Query: 354 TDKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSATQLPAPTRDSQRQAAANQFQQ 413
                    N N  N V  +       +H   VN         APT  +  + A     Q
Sbjct: 301 ---------NINQYNNV--NRSTTVNNYHNAPVN---QVPHFAAPTPYAAPKVAN---LQ 343

Query: 414 RTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFHDFSRRQPLTQQQKDAARQRYQSASPE 473
           + H  P +  + ++   A  F  A     +          P+   Q+      +  ++P 
Sbjct: 344 QPHFTPPVAANERQPMTAPNFAHAATPAPH-------AMTPVAHVQQPMTLPSFAHSTP- 395

Query: 474 QRQAVRER--MQTNPKIQQRREAARERIQSASPEQRQAVREKMQTNPQNQQRRDAARERI 531
              AVR      T P  Q     AR      +PEQ       +Q     Q+ +  A E +
Sbjct: 396 --AAVRPHPATVTAPVHQAEMRPAR------TPEQHLPTPVSVQ-----QRAQLPAVEPV 442

Query: 532 QSASPEQRQVFKEKVQQRPLNQQQRDNARQRVQSASPEQRQ---VFREKVQESRPQRLND 588
           +  +P+   +  + VQ RP N     +A         +Q Q       K QE RP ++ +
Sbjct: 443 EHVAPKANVIRPQPVQPRP-NAMMSHSAPTPFHQPQIQQAQHHPAPAAKPQEHRPLKVEE 501